RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 PLCD1P51178 756 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 SPECC1LQ69YQ0 1117 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 GTPBP4Q9BZE4 634 aaKnown RBP23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 UBE4AQ14139 1066 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 BAG1Q99933 345 aaPredicted RBP23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 CDCA7Q9BWT1 371 aaPredicted RBP23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 BRIP1Q9BX63 1249 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 ZNF652Q9Y2D9 606 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 PPP2R2CQ9Y2T4 447 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 A0A1B0GUL6 1792 aa23.13■■□□□ 1.29
RPUSD1-202ENST00000561734 SPATA31A1Q5TZJ5 1347 aa23.12■■□□□ 1.29
RPUSD1-202ENST00000561734 BAZ2AQ9UIF9 1905 aaKnown RBP23.12■■□□□ 1.29
RPUSD1-202ENST00000561734 TC2NQ8N9U0 490 aa23.12■■□□□ 1.29
RPUSD1-202ENST00000561734 MYH2Q9UKX2 1941 aa23.12■■□□□ 1.29
RPUSD1-202ENST00000561734 VWA3AA6NCI4 1184 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 ZSCAN12O43309 604 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 ADKP55263 362 aaKnown RBP23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 TROAPQ12815 778 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 CAVIN4Q5BKX8 364 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 NOM1Q5C9Z4 860 aaKnown RBP23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 AFMP43652 599 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 EVX2Q03828 476 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 CTR9Q6PD62 1173 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 IQCA1Q86XH1 822 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 SYMPKQ92797 1274 aaKnown RBP23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 RBM28Q9NW13 759 aaKnown RBP23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 BSDC1Q9NW68 430 aaPredicted RBP23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 TAF1P21675 1872 aa23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 COL22A1Q8NFW1 1626 aaPredicted RBP23.11■■□□□ 1.29
RPUSD1-202ENST00000561734 ERCC5P28715 1186 aaPredicted RBP23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 CASP1P29466 404 aa23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 FAM84BQ96KN1 310 aaPredicted RBP23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 MINPP1Q9UNW1 487 aa23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 SCN7AQ01118 1682 aa23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 SLFN14P0C7P3 912 aa23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 PAGE5Q96GU1 130 aa23.1■■□□□ 1.29
RPUSD1-202ENST00000561734 STX10O60499 249 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 FGRP09769 529 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 H2AFXP16104 143 aaPredicted RBP23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 NR1I3Q14994 352 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 NPY5RQ15761 445 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 TOGARAM2Q6ZUX3 1019 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 TNFRSF25Q93038 417 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 ZNF446Q9NWS9 450 aa23.09■■□□□ 1.29
RPUSD1-202ENST00000561734 USP17L12C9JPN9 530 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 USP17L21D6R901 530 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 CD44P16070 742 aaKnown RBP23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 SF3B3Q15393 1217 aaKnown RBP23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 ZNF174Q15697 407 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 TMTC3Q6ZXV5 915 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 SH3RF1Q7Z6J0 888 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 URI1O94763 535 aaPredicted RBP23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 ADAMTS2O95450 1211 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 CALM1P0DP23 149 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 CALM2P0DP24 149 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 CALM3P0DP25 149 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 KLHL10Q6JEL2 608 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 FERMT2Q96AC1 680 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 ZHX1Q9UKY1 873 aaPredicted RBP23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 PARP3Q9Y6F1 533 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
RPUSD1-202ENST00000561734 CNTNAP5Q8WYK1 1306 aa23.08■■□□□ 1.28
RPUSD1-202ENST00000561734 A0A1B0GTH6 734 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 DDAH1O94760 285 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 KLRK1P26718 216 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 CELF1Q92879 486 aaKnown RBP23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 CCDC34Q96HJ3 373 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 BRMS1Q9HCU9 246 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 THRAP3Q9Y2W1 955 aaKnown RBP23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 DLEC1Q9Y238 1755 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 NMT2O60551 498 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 IGSF3O75054 1194 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 PCP11498 1178 aaKnown RBP23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 STX17P56962 302 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 ARHGAP29Q52LW3 1261 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 TTC38Q5R3I4 469 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 CLEC4GQ6UXB4 293 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 KRT222Q8N1A0 295 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 FAM53CQ9NYF3 392 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 SYNRGQ9UMZ2 1314 aa23.07■■□□□ 1.28
RPUSD1-202ENST00000561734 BMP15O95972 392 aa23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 DPYDQ12882 1025 aa23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 CUL4BQ13620 913 aa23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 APTXQ7Z2E3 356 aaKnown RBP23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 SRBD1Q8N5C6 995 aaKnown RBP23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 NSUN4Q96CB9 384 aaKnown RBP23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 TEX33O43247 280 aa23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 KCNQ2O43526 872 aa23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 SPATA1Q5VX52 437 aa23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 SMYD4Q8IYR2 804 aaPredicted RBP23.06■■□□□ 1.28
RPUSD1-202ENST00000561734 CASZ1Q86V15 1759 aa23.05■■□□□ 1.28
RPUSD1-202ENST00000561734 MECOMQ03112 1051 aa23.05■■□□□ 1.28
RPUSD1-202ENST00000561734 FAM47AQ5JRC9 791 aa23.05■■□□□ 1.28
RPUSD1-202ENST00000561734 BICDL1Q6ZP65 573 aa23.05■■□□□ 1.28
RPUSD1-202ENST00000561734 WDR24Q96S15 920 aa23.05■■□□□ 1.28
RPUSD1-202ENST00000561734 GOLGA6L9A6NEM1 432 aa23.04■■□□□ 1.28
RPUSD1-202ENST00000561734 PTGDRQ13258 359 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms