RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
AC010542.3-202ENST00000561728 PRKAG3Q9UGI9 489 aa12.18□□□□□ -0.46
AC010542.3-202ENST00000561728 TBX21Q9UL17 535 aa12.18□□□□□ -0.46
AC010542.3-202ENST00000561728 USP24Q9UPU5 2620 aa12.18□□□□□ -0.46
AC010542.3-202ENST00000561728 VPS13AQ96RL7 3174 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 KDM4AO75164 1064 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 HMGCS2P54868 508 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 ERVK-9P63128 1117 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 ERVK-24P63145 666 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 PUM1Q14671 1186 aaKnown RBP eCLIP12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 EDAQ92838 391 aa12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 NKD2Q969F2 451 aaPredicted RBP12.17□□□□□ -0.46
AC010542.3-202ENST00000561728 MYH3P11055 1940 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 ZBBXA8MT70 800 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 ATP2A2P16615 1042 aaKnown RBP12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 ITGA6P23229 1130 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 IRS1P35568 1242 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 NBL1P41271 181 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 WDR78Q5VTH9 848 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 TRIM67Q6ZTA4 783 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 CFAP53Q96M91 514 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 FLNBO75369 2602 aaKnown RBP12.16□□□□□ -0.46
AC010542.3-202ENST00000561728 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 DOCK1Q14185 1865 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 HERVK_113P62684 666 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 SPP2Q13103 211 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 GRIK5Q16478 980 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 HDGFL1Q5TGJ6 251 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 RNF180Q86T96 592 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 ADHFE1Q8IWW8 467 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 PHIPQ8WWQ0 1821 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 SPTBN2O15020 2390 aa12.15□□□□□ -0.46
AC010542.3-202ENST00000561728 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 HOXB3P14651 431 aaPredicted RBP12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 Q3C1V9 767 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 SH2B1Q9NRF2 756 aaPredicted RBP12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 ZNF292O60281 2723 aa12.14□□□□□ -0.47
AC010542.3-202ENST00000561728 EP300Q09472 2414 aaPredicted RBP12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 MAST3O60307 1309 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 SLC15A5A6NIM6 579 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 VCPP55072 806 aaKnown RBP12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 XPNPEP3Q9NQH7 507 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
AC010542.3-202ENST00000561728 LPXNO60711 386 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 HOXC6P09630 235 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 AVPR2P30518 371 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 NPLOC4Q8TAT6 608 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 POP1Q99575 1024 aaKnown RBP12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
AC010542.3-202ENST00000561728 WDR87Q6ZQQ6 2873 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 RARBP10826 455 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 PTPREP23469 700 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 NUBP1P53384 320 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 CCNA1P78396 465 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 TAP1Q03518 808 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 NFIAQ12857 509 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 MAST4O15021 2626 aa12.11□□□□□ -0.47
AC010542.3-202ENST00000561728 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
AC010542.3-202ENST00000561728 CYP2C18P33260 490 aa12.1□□□□□ -0.47
AC010542.3-202ENST00000561728 GYG1P46976 350 aa12.1□□□□□ -0.47
AC010542.3-202ENST00000561728 FRMD5Q7Z6J6 570 aa12.1□□□□□ -0.47
AC010542.3-202ENST00000561728 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms