RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SAP30BPQ9UHR5 308 aaKnown RBP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 PCDHA7Q9UN72 937 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 CNTNAP5Q8WYK1 1306 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 H0YIN7 160 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 WDHD1O75717 1129 aaPredicted RBP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 YEATS4O95619 227 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 MMP1P03956 469 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 PDE4BQ07343 736 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 NPY5RQ15761 445 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 AXDND1Q5T1B0 1012 aaPredicted RBP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 RNF26Q9BY78 433 aaPredicted RBP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 DDX4Q9NQI0 724 aaKnown RBP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBGCP4-202ENST00000561691 CCDC196A0A1B0GTZ2 297 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 DEXIO95424 95 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 TOB1P50616 345 aaPredicted RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 TFAP4Q01664 338 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 GABPAQ06546 454 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 APOBEC3HQ6NTF7 200 aaKnown RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 CATIPQ7Z7H3 387 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 DGKHQ86XP1 1220 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 PDCL2Q8N4E4 241 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 SRBD1Q8N5C6 995 aaKnown RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 ANKRD7Q92527 254 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 KCNJ14Q9UNX9 436 aa11.81□□□□□ -0.52
TUBGCP4-202ENST00000561691 A0A1W2PQ27 194 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 A0A1W2PQ64 194 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 A0A1W2PQD8 194 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 USP17L3A6NCW0 530 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 USP17L4A6NCW7 530 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 PLCG2P16885 1265 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 CDK8P49336 464 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 GABPB1Q06547 395 aaPredicted RBP11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 DACT2Q5SW24 774 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 USP17L1Q7RTZ2 530 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 CALM1P0DP23 149 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 CALM2P0DP24 149 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 CALM3P0DP25 149 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 CDK11BP21127 795 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 KCNA3P22001 575 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 SLC39A14Q15043 492 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 HHIPL2Q6UWX4 724 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 PODNQ7Z5L7 613 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 SLF2Q8IX21 1173 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 TNFRSF25Q93038 417 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 NUP62CLQ9H1M0 184 aa11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 RBM28Q9NW13 759 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-202ENST00000561691 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 TSPY2A6NKD2 308 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 FKBP1AP62942 108 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 ADALQ6DHV7 355 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 NOSTRINQ8IVI9 506 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 CCAR1Q8IX12 1150 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 DIS3L2Q8IYB7 885 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 FMR1NBQ8N0W7 255 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 WASF1Q92558 559 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 CNKSR1Q969H4 720 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 EYA3Q99504 573 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 FEZ1Q99689 392 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 PHF20Q9BVI0 1012 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 SPTLC3Q9NUV7 552 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 TTF2Q9UNY4 1162 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 PCDHAC2Q9Y5I4 1007 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
TUBGCP4-202ENST00000561691 MYH1P12882 1939 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 F8W031 263 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 ADAMTS3O15072 1205 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 SPTLC2O15270 562 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 NR5A1Q13285 461 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 CAMK4Q16566 473 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 EARS2Q5JPH6 523 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 DNTTIP2Q5QJE6 756 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 CDC42EP5Q6NZY7 148 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 BICD2Q8TD16 824 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 KCNG4Q8TDN1 519 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 COL4A5P29400 1685 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 IGKV6D-41A0A0C4DH26 115 aa11.78□□□□□ -0.52
TUBGCP4-202ENST00000561691 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms