RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 DNM1LO00429 736 aa22.39■■□□□ 1.17
COMMD4-204ENST00000561662 PTPREP23469 700 aa22.39■■□□□ 1.17
COMMD4-204ENST00000561662 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
COMMD4-204ENST00000561662 GTF3C2Q8WUA4 911 aaPredicted RBP22.39■■□□□ 1.17
COMMD4-204ENST00000561662 FEZ1Q99689 392 aa22.39■■□□□ 1.17
COMMD4-204ENST00000561662 MUC3AQ02505 3323 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 SLC15A5A6NIM6 579 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 GLRX3O76003 335 aaKnown RBP22.38■■□□□ 1.17
COMMD4-204ENST00000561662 BAG3O95817 575 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 FOSL2P15408 326 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 CCNA1P78396 465 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 TRIM60Q495X7 471 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 SH3RF1Q7Z6J0 888 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 FOXP4Q8IVH2 680 aaPredicted RBP22.38■■□□□ 1.17
COMMD4-204ENST00000561662 BTBD7Q9P203 1132 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 IVNS1ABPQ9Y6Y0 642 aa22.38■■□□□ 1.17
COMMD4-204ENST00000561662 TTC28Q96AY4 2481 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L15C9J2P7 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L13C9JLJ4 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L11C9JVI0 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L18D6R9N7 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L22D6RA61 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L17D6RBQ6 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L19D6RCP7 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L20D6RJB6 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 DYNLL1P63167 89 aaKnown RBP22.37■■□□□ 1.17
COMMD4-204ENST00000561662 USP17L24Q0WX57 530 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 METTL16Q86W50 562 aaKnown RBP22.37■■□□□ 1.17
COMMD4-204ENST00000561662 CDCA7LQ96GN5 454 aa22.37■■□□□ 1.17
COMMD4-204ENST00000561662 SLFN5Q08AF3 891 aa22.36■■□□□ 1.17
COMMD4-204ENST00000561662 RAB3GAP1Q15042 981 aa22.36■■□□□ 1.17
COMMD4-204ENST00000561662 SLC39A5Q6ZMH5 540 aa22.36■■□□□ 1.17
COMMD4-204ENST00000561662 TRMT2AQ8IZ69 625 aaKnown RBP22.36■■□□□ 1.17
COMMD4-204ENST00000561662 FERMT2Q96AC1 680 aa22.36■■□□□ 1.17
COMMD4-204ENST00000561662 MSCO60682 206 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 CYBAP13498 195 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 PLCG2P16885 1265 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 GRB14Q14449 540 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 CATSPERGQ6ZRH7 1159 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 ACER1Q8TDN7 264 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 HDAC5Q9UQL6 1122 aa22.35■■□□□ 1.17
COMMD4-204ENST00000561662 CDK5RAP2Q96SN8 1893 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 TRIM43BA6NCK2 446 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 KBTBD13C9JR72 458 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 HLA-DOAP06340 250 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 VCAM1P19320 739 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 TRIM43Q96BQ3 446 aaPredicted RBP22.34■■□□□ 1.17
COMMD4-204ENST00000561662 PDLIM7Q9NR12 457 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 GINM1Q9NU53 330 aa22.34■■□□□ 1.17
COMMD4-204ENST00000561662 UQCRFS1P1P0C7P4 283 aa22.33■■□□□ 1.17
COMMD4-204ENST00000561662 ADCYAP1R1P41586 468 aa22.33■■□□□ 1.17
COMMD4-204ENST00000561662 PPP4CP60510 307 aa22.33■■□□□ 1.17
COMMD4-204ENST00000561662 SMAD3P84022 425 aaKnown RBP22.33■■□□□ 1.17
COMMD4-204ENST00000561662 PRAMEF19Q5SWL8 479 aa22.33■■□□□ 1.17
COMMD4-204ENST00000561662 API5Q9BZZ5 524 aaKnown RBP22.33■■□□□ 1.17
COMMD4-204ENST00000561662 RAPGEFL1Q9UHV5 662 aa22.33■■□□□ 1.17
COMMD4-204ENST00000561662 RLFQ13129 1914 aa22.33■■□□□ 1.16
COMMD4-204ENST00000561662 SPDYE16A6NNV3 312 aaPredicted RBP22.32■■□□□ 1.16
COMMD4-204ENST00000561662 HOXC6P09630 235 aa22.32■■□□□ 1.16
COMMD4-204ENST00000561662 TTC39AQ5SRH9 613 aa22.32■■□□□ 1.16
COMMD4-204ENST00000561662 DPP9Q86TI2 863 aa22.32■■□□□ 1.16
COMMD4-204ENST00000561662 USP38Q8NB14 1042 aa22.32■■□□□ 1.16
COMMD4-204ENST00000561662 ARRDC4Q8NCT1 418 aa22.32■■□□□ 1.16
COMMD4-204ENST00000561662 C12orf42Q96LP6 360 aa22.32■■□□□ 1.16
COMMD4-204ENST00000561662 RPAP3Q9H6T3 665 aaPredicted RBP22.32■■□□□ 1.16
COMMD4-204ENST00000561662 CYP2E1P05181 493 aaPredicted RBP22.31■■□□□ 1.16
COMMD4-204ENST00000561662 ITGB8P26012 769 aa22.31■■□□□ 1.16
COMMD4-204ENST00000561662 EPHB4P54760 987 aa22.31■■□□□ 1.16
COMMD4-204ENST00000561662 MIGA1Q8NAN2 632 aa22.31■■□□□ 1.16
COMMD4-204ENST00000561662 PIH1D3Q9NQM4 214 aaKnown RBP22.31■■□□□ 1.16
COMMD4-204ENST00000561662 FOCADQ5VW36 1801 aa22.3■■□□□ 1.16
COMMD4-204ENST00000561662 PNMA6EA0A0J9YXQ4 647 aa22.3■■□□□ 1.16
COMMD4-204ENST00000561662 COL9A1P20849 921 aa22.3■■□□□ 1.16
COMMD4-204ENST00000561662 ADORA2AP29274 412 aa22.3■■□□□ 1.16
COMMD4-204ENST00000561662 G3BP1Q13283 466 aaKnown RBP eCLIP22.3■■□□□ 1.16
COMMD4-204ENST00000561662 RNPC3Q96LT9 517 aaKnown RBP22.3■■□□□ 1.16
COMMD4-204ENST00000561662 MYO5AQ9Y4I1 1855 aaKnown RBP22.29■■□□□ 1.16
COMMD4-204ENST00000561662 IGHA2P01877 340 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 GNAI3P08754 354 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 USP14P54578 494 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 MTX1Q13505 466 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 GRIN2CQ14957 1233 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 SYMPKQ92797 1274 aaKnown RBP22.29■■□□□ 1.16
COMMD4-204ENST00000561662 DBNDD2Q9BQY9 259 aa22.29■■□□□ 1.16
COMMD4-204ENST00000561662 MOV10L1Q9BXT6 1211 aaKnown RBP22.29■■□□□ 1.16
COMMD4-204ENST00000561662 COBLO75128 1261 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 CYP7A1P22680 504 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 ZAP70P43403 619 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 TLE2Q04725 743 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 ABCB5Q2M3G0 1257 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 FAM47AQ5JRC9 791 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
COMMD4-204ENST00000561662 SEPT4O43236 478 aa22.27■■□□□ 1.16
COMMD4-204ENST00000561662 USP5P45974 858 aa22.27■■□□□ 1.16
COMMD4-204ENST00000561662 SNX17Q15036 470 aa22.27■■□□□ 1.16
COMMD4-204ENST00000561662 LRRC41Q15345 812 aa22.27■■□□□ 1.16
COMMD4-204ENST00000561662 CERKLQ49MI3 558 aaPredicted RBP22.27■■□□□ 1.16
COMMD4-204ENST00000561662 TATDN1Q6P1N9 297 aa22.27■■□□□ 1.16
COMMD4-204ENST00000561662 LBX2Q6XYB7 198 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms