RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CCDC136Q96JN2 1154 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 NAPBQ9H115 298 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 ZFYVE28Q9HCC9 887 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
TPM1-230ENST00000561266 AGTPBP1Q9UPW5 1226 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 DOCK3Q8IZD9 2030 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
TPM1-230ENST00000561266 PPARAQ07869 468 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 ALX1Q15699 326 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 TNS4Q8IZW8 715 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 PROCA1Q8NCQ7 364 aaPredicted RBP16.6■□□□□ 0.25
TPM1-230ENST00000561266 CD99L2Q8TCZ2 262 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 NBPF3Q9H094 633 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
TPM1-230ENST00000561266 MGAMO43451 1857 aa16.59■□□□□ 0.25
TPM1-230ENST00000561266 RLFQ13129 1914 aa16.59■□□□□ 0.25
TPM1-230ENST00000561266 MYH4Q9Y623 1939 aa16.59■□□□□ 0.25
TPM1-230ENST00000561266 ECM2O94769 699 aaPredicted RBP16.59■□□□□ 0.25
TPM1-230ENST00000561266 CHMLP26374 656 aa16.59■□□□□ 0.25
TPM1-230ENST00000561266 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
TPM1-230ENST00000561266 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
TPM1-230ENST00000561266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
TPM1-230ENST00000561266 C19orf81C9J6K1 198 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 NEFLP07196 543 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 BCRP11274 1271 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 SP3Q02447 781 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 CCDC17Q96LX7 622 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 MCOLN1Q9GZU1 580 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
TPM1-230ENST00000561266 PARP14Q460N5 1801 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 HAND2P61296 217 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
TPM1-230ENST00000561266 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
TPM1-230ENST00000561266 MKNK2Q9HBH9 465 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 ANAPC4Q9UJX5 808 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
TPM1-230ENST00000561266 EEF2P13639 858 aaKnown RBP16.56■□□□□ 0.24
TPM1-230ENST00000561266 CTU1Q7Z7A3 348 aaKnown RBP16.56■□□□□ 0.24
TPM1-230ENST00000561266 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
TPM1-230ENST00000561266 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
TPM1-230ENST00000561266 HTTP42858 3142 aa16.56■□□□□ 0.24
TPM1-230ENST00000561266 VCAM1P19320 739 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
TPM1-230ENST00000561266 PTH1RQ03431 593 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 ICA1Q05084 483 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 OTOP1Q7RTM1 612 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
TPM1-230ENST00000561266 FEZ1Q99689 392 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 TMX2Q9Y320 296 aa16.55■□□□□ 0.24
TPM1-230ENST00000561266 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
TPM1-230ENST00000561266 HIP1O00291 1037 aa16.54■□□□□ 0.24
TPM1-230ENST00000561266 FGRP09769 529 aa16.54■□□□□ 0.24
TPM1-230ENST00000561266 LACTBP83111 547 aaPredicted RBP16.54■□□□□ 0.24
TPM1-230ENST00000561266 TXNRD2Q9NNW7 524 aa16.54■□□□□ 0.24
TPM1-230ENST00000561266 NMT2O60551 498 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 TFAP4Q01664 338 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 CATSPERGQ6ZRH7 1159 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
TPM1-230ENST00000561266 SPICE1Q8N0Z3 855 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 ERO1AQ96HE7 468 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 IL17RBQ9NRM6 502 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 TRIM17Q9Y577 477 aa16.53■□□□□ 0.24
TPM1-230ENST00000561266 SGSM2O43147 1006 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 PDE4BQ07343 736 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 Q3C1V9 767 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 ABHD8Q96I13 439 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 TRIM47Q96LD4 638 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 DSCC1Q9BVC3 393 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 RPAP3Q9H6T3 665 aaPredicted RBP16.52■□□□□ 0.24
TPM1-230ENST00000561266 VCPKMTQ9H867 229 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
TPM1-230ENST00000561266 PLXNB2O15031 1838 aa16.52■□□□□ 0.23
TPM1-230ENST00000561266 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
TPM1-230ENST00000561266 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
TPM1-230ENST00000561266 ORC4O43929 436 aa16.51■□□□□ 0.23
TPM1-230ENST00000561266 CNMDO75829 334 aa16.51■□□□□ 0.23
TPM1-230ENST00000561266 OSBPP22059 807 aa16.51■□□□□ 0.23
TPM1-230ENST00000561266 USP14P54578 494 aa16.51■□□□□ 0.23
TPM1-230ENST00000561266 HERVK_113P62684 666 aa16.51■□□□□ 0.23
TPM1-230ENST00000561266 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms