RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 KIAA1683Q9H0B3 1180 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 RNF41Q9H4P4 317 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 KANSL2Q9H9L4 492 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 SAGE1Q9NXZ1 904 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 CASP8AP2Q9UKL3 1982 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 ALDH1A1P00352 501 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 NOVP48745 357 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 NECTIN1Q15223 517 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 CCL15Q16663 113 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 OTUD7BQ6GQQ9 843 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 MFSD6Q6ZSS7 791 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 FASTKD5Q7L8L6 764 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 MKL1Q969V6 931 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 C12orf42Q96LP6 360 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 SYNPO2Q9UMS6 1093 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 SLC45A1Q9Y2W3 748 aa11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-221ENST00000561055 PRDM1O75626 825 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 CAPN15O75808 1086 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 CYP21A2P08686 494 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 HAND2P61296 217 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 TFAP4Q01664 338 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 ANKRD23Q86SG2 305 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 CCDC84Q86UT8 332 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 TBC1D10CQ8IV04 446 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 RNF186Q9NXI6 227 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 NYAP2Q9P242 653 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 TMX2Q9Y320 296 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 RBM8AQ9Y5S9 174 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 DOCK3Q8IZD9 2030 aa11.41□□□□□ -0.58
RABGGTA-221ENST00000561055 A0A1W2PRG0 241 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 TRIM75PA6NK02 468 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 BTBD19C9JJ37 291 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 MPHOSPH10O00566 681 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 TSPY3P0CV98 308 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 TSPY8P0CW00 308 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 USP14P54578 494 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 STK11IPQ8N1F8 1099 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 FAM43AQ8N2R8 423 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 CNNM2Q9H8M5 875 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 ARHGEF10LQ9HCE6 1279 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 ANO2Q9NQ90 1003 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 AGTPBP1Q9UPW5 1226 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 MYH6P13533 1939 aa11.4□□□□□ -0.58
RABGGTA-221ENST00000561055 ZNFX1Q9P2E3 1918 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 TSPY2A6NKD2 308 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 REC8O95072 547 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 EEF2P13639 858 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 HMGCS2P54868 508 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 ICA1Q05084 483 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 MTMR2Q13614 643 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 FAM47AQ5JRC9 791 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 ESR2Q92731 530 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 KCNB2Q92953 911 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 TTC14Q96N46 770 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 KRT23Q9C075 422 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
RABGGTA-221ENST00000561055 A0A0G2JMZ2 1700 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 E7EWF7 191 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 PDHXO00330 501 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 EIF5BO60841 1220 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 TRPA1O75762 1119 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 TTLL1O95922 423 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 HSPA1AP0DMV8 641 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 HSPA1BP0DMV9 641 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 CREB3L3Q68CJ9 461 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 ANKS1AQ92625 1134 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 LPAR1Q92633 364 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 CEP95Q96GE4 821 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 TMOD4Q9NZQ9 345 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
RABGGTA-221ENST00000561055 NEDD4P46934 1319 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 SLC27A2O14975 620 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 FOXN1O15353 648 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 PABPC4Q13310 644 aaKnown RBP eCLIP11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 CCDC178Q5BJE1 867 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 TREML2Q5T2D2 321 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms