RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PPFIA3O75145 1194 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 SPDYE6P0CI01 402 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 AKAP17AQ02040 695 aaKnown RBP19.87■□□□□ 0.77
HDDC3-206ENST00000561036 CXCL9Q07325 125 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 CIAPIN1Q6FI81 312 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 FOXP4Q8IVH2 680 aaPredicted RBP19.87■□□□□ 0.77
HDDC3-206ENST00000561036 PNMA1Q8ND90 353 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 GPT2Q8TD30 523 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 SPON1Q9HCB6 807 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 TMOD2Q9NZR1 351 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 RBM27Q9P2N5 1060 aaKnown RBP19.87■□□□□ 0.77
HDDC3-206ENST00000561036 PI4KBQ9UBF8 816 aa19.87■□□□□ 0.77
HDDC3-206ENST00000561036 TOP1P11387 765 aaKnown RBP19.86■□□□□ 0.77
HDDC3-206ENST00000561036 FOSBP53539 338 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 GUCY1B3Q02153 619 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 GRM4Q14833 912 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 DLGAP5Q15398 846 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 FKBP1CQ5VVH2 108 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 KRT40Q6A162 431 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 METTL16Q86W50 562 aaKnown RBP19.86■□□□□ 0.77
HDDC3-206ENST00000561036 KLHL34Q8N239 644 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
HDDC3-206ENST00000561036 TMEM47Q9BQJ4 181 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 LZTS2Q9BRK4 669 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 GDPD2Q9HCC8 539 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 PCDHAC2Q9Y5I4 1007 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 TCHHQ07283 1943 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 ARFGEF1Q9Y6D6 1849 aa19.86■□□□□ 0.77
HDDC3-206ENST00000561036 IGKV6D-41A0A0C4DH26 115 aa19.85■□□□□ 0.77
HDDC3-206ENST00000561036 RPS12P25398 132 aaKnown RBP19.85■□□□□ 0.77
HDDC3-206ENST00000561036 SHMT1P34896 483 aa19.85■□□□□ 0.77
HDDC3-206ENST00000561036 TDRD3Q9H7E2 651 aaKnown RBP19.85■□□□□ 0.77
HDDC3-206ENST00000561036 XBP1P17861 261 aa19.84■□□□□ 0.77
HDDC3-206ENST00000561036 KIF23Q02241 960 aaPredicted RBP19.84■□□□□ 0.77
HDDC3-206ENST00000561036 FAM173BQ6P4H8 233 aa19.84■□□□□ 0.77
HDDC3-206ENST00000561036 ZFPM1Q8IX07 1006 aa19.84■□□□□ 0.77
HDDC3-206ENST00000561036 LEO1Q8WVC0 666 aaPredicted RBP19.84■□□□□ 0.77
HDDC3-206ENST00000561036 STX8Q9UNK0 236 aa19.84■□□□□ 0.77
HDDC3-206ENST00000561036 PLEKHA8P1O95397 391 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 SAFBQ15424 915 aaKnown RBP eCLIP19.83■□□□□ 0.77
HDDC3-206ENST00000561036 OTUD7BQ6GQQ9 843 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 SYAP1Q96A49 352 aaPredicted RBP19.83■□□□□ 0.77
HDDC3-206ENST00000561036 CEP95Q96GE4 821 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 SPATA32Q96LK8 384 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 AIFM3Q96NN9 605 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.83■□□□□ 0.77
HDDC3-206ENST00000561036 MTMR4Q9NYA4 1195 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 RCOR1Q9UKL0 485 aa19.83■□□□□ 0.77
HDDC3-206ENST00000561036 MYH15Q9Y2K3 1946 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 CNTNAP5Q8WYK1 1306 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 GADD45BO75293 160 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 SMARCA1P28370 1054 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 CACNB3P54284 484 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 TCP10Q12799 353 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 SPDYE2Q495Y8 402 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 SRBD1Q8N5C6 995 aaKnown RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 ZBED3Q96IU2 234 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 TRIM34Q9BYJ4 488 aa19.82■□□□□ 0.76
HDDC3-206ENST00000561036 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 TFIP11Q9UBB9 837 aaKnown RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 ZNF70Q9UC06 446 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 ISY1Q9ULR0 285 aaKnown RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 ZBTB12Q9Y330 459 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-206ENST00000561036 MYH8P13535 1937 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 PALM3A6NDB9 673 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-206ENST00000561036 DDTLA6NHG4 134 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-206ENST00000561036 MMP1P03956 469 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 AKR1B1P15121 316 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 GUCY1A2P33402 732 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 PKN1Q16512 942 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 TATDN1Q6P1N9 297 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 SH3BP5LQ7L8J4 393 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 ZSCAN29Q8IWY8 852 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-206ENST00000561036 FAM177A1Q8N128 213 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-206ENST00000561036 CMTR1Q8N1G2 835 aaKnown RBP19.81■□□□□ 0.76
HDDC3-206ENST00000561036 CCDC82Q8N4S0 544 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 FAM151AQ8WW52 585 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 RTEL1Q9NZ71 1219 aa19.81■□□□□ 0.76
HDDC3-206ENST00000561036 V9GY48 417 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-206ENST00000561036 FZD9O00144 591 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 MYO1BO43795 1136 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 TTLL1O95922 423 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 EIF6P56537 245 aaKnown RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 ZNF280AP59817 542 aaPredicted RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 GNL2Q13823 731 aaKnown RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 CAVIN1Q6NZI2 390 aaKnown RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 NLGN2Q8NFZ4 835 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 FOXP1Q9H334 677 aaPredicted RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 GJB4Q9NTQ9 266 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 MAD2L2Q9UI95 211 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 HERC5Q9UII4 1024 aaKnown RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 SIPA1L1O43166 1804 aa19.8■□□□□ 0.76
HDDC3-206ENST00000561036 GREB1LQ9C091 1923 aaPredicted RBP19.8■□□□□ 0.76
HDDC3-206ENST00000561036 FAM83AQ86UY5 434 aa19.79■□□□□ 0.76
HDDC3-206ENST00000561036 DPF2Q92785 391 aa19.79■□□□□ 0.76
HDDC3-206ENST00000561036 DNAJC18Q9H819 358 aa19.79■□□□□ 0.76
HDDC3-206ENST00000561036 POLR3EQ9NVU0 708 aa19.79■□□□□ 0.76
HDDC3-206ENST00000561036 GOLGA6L4A6NEF3 574 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms