RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 NYXQ9GZU5 481 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 PCDHA7Q9UN72 937 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 CACNA1SQ13698 1873 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 YEATS4O95619 227 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 NTRK3Q16288 839 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 MCTP2Q6DN12 878 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 ZNF622Q969S3 477 aaKnown RBP eCLIP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 ALG1Q9BT22 464 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 FAM217BQ9NTX9 383 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 POLR3EQ9NVU0 708 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 KIAA1468Q9P260 1216 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 CLIC4Q9Y696 253 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 NID2Q14112 1375 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 TUBB2AQ13885 445 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 MMS22LQ6ZRQ5 1243 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 FMR1NBQ8N0W7 255 aaPredicted RBP15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 AIFM3Q96NN9 605 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 TUBB2BQ9BVA1 445 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 RAI14Q9P0K7 980 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 VPS18Q9P253 973 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 ABCF2Q9UG63 623 aa15.88■□□□□ 0.13
RABGGTA-220ENST00000560998 MAGEB6P1A0A0J9YX57 407 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 FANCGO15287 622 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 TUBBP07437 444 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 NLRP12P59046 1061 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 STK38Q15208 465 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 ADALQ6DHV7 355 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 FAM71BQ8TC56 605 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 KCNG4Q8TDN1 519 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 PHKBQ93100 1093 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 FAM84BQ96KN1 310 aaPredicted RBP15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 ACBD3Q9H3P7 528 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 GNPATO15228 680 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 FANCCQ00597 558 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 MYL10Q9BUA6 226 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 GBP3Q9H0R5 595 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 RAB21Q9UL25 225 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 PPP2R2CQ9Y2T4 447 aa15.87■□□□□ 0.13
RABGGTA-220ENST00000560998 TAF1LQ8IZX4 1826 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 ZPR1O75312 459 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 IARSP41252 1262 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 GSCP56915 257 aaPredicted RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 PPARAQ07869 468 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 KRT40Q6A162 431 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 FBXO33Q7Z6M2 555 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 RPAINQ86UA6 219 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 NBPF5PQ86XG9 351 aaPredicted RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 DRC1Q96MC2 740 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 NLRP3Q96P20 1036 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 RNF41Q9H4P4 317 aaPredicted RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 USP21Q9UK80 565 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 SPTLC2O15270 562 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 NCAPHQ15003 741 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 DPCR1Q3MIW9 517 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 ANO1Q5XXA6 986 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 MSANTD4Q8NCY6 345 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 RIOK1Q9BRS2 568 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 MED4Q9NPJ6 270 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
RABGGTA-220ENST00000560998 MYH13Q9UKX3 1938 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 LY75O60449 1722 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 A0A087WUV0 522 aaPredicted RBP15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 SEMA3EO15041 775 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 KIF1CO43896 1103 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 GNG11P61952 73 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 SART3Q15020 963 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 SF3A1Q15459 793 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 BEND6Q5SZJ8 279 aaPredicted RBP15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 CEP112Q8N8E3 955 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 PDE11AQ9HCR9 933 aa15.85■□□□□ 0.13
RABGGTA-220ENST00000560998 PPFIA4O75335 1185 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 CCDC172P0C7W6 258 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 KLRK1P26718 216 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 WTAPQ15007 396 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 SRGAP1Q7Z6B7 1085 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms