RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 XBP1P17861 261 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 NPY5RQ15761 445 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 EPSTI1Q96J88 318 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 GNPATO15228 680 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 MORC3Q14149 939 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
CRTC3-210ENST00000560927 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
CRTC3-210ENST00000560927 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 MED15Q96RN5 788 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 NYXQ9GZU5 481 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
CRTC3-210ENST00000560927 MYH13Q9UKX3 1938 aa16.72■□□□□ 0.27
CRTC3-210ENST00000560927 RPS6KA4O75676 772 aa16.71■□□□□ 0.27
CRTC3-210ENST00000560927 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
CRTC3-210ENST00000560927 CNTNAP5Q8WYK1 1306 aa16.71■□□□□ 0.27
CRTC3-210ENST00000560927 CBFA2T2O43439 604 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 ORC4O43929 436 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 DDAH1O94760 285 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.26
CRTC3-210ENST00000560927 VEGFAP15692 232 aaPredicted RBP16.71■□□□□ 0.26
CRTC3-210ENST00000560927 TM4SF1P30408 202 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 FAM182BQ5T319 152 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 TNFRSF25Q93038 417 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 DHX58Q96C10 678 aa16.71■□□□□ 0.26
CRTC3-210ENST00000560927 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.26
CRTC3-210ENST00000560927 CALM1P0DP23 149 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 CALM2P0DP24 149 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 CALM3P0DP25 149 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 C8orf37Q96NL8 207 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 NFE2L3Q9Y4A8 694 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 ADAMTS3O15072 1205 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 ZPR1O75312 459 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 CASP1P29466 404 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 ZNF174Q15697 407 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 ANKRD2Q9GZV1 360 aa16.7■□□□□ 0.26
CRTC3-210ENST00000560927 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 MLKLQ8NB16 471 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 SPATA20Q8TB22 786 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 ZNF215Q9UL58 517 aaPredicted RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 BAZ2BQ9UIF8 2168 aaKnown RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 ZNF18P17022 549 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 AFMP43652 599 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 KCNJ6P48051 423 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 KIF18AQ8NI77 898 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 SYMPKQ92797 1274 aaKnown RBP16.69■□□□□ 0.26
CRTC3-210ENST00000560927 IRS2Q9Y4H2 1338 aa16.69■□□□□ 0.26
CRTC3-210ENST00000560927 RGL2O15211 777 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 USP17L8P0C7I0 530 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 SYCP1Q15431 976 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 MYO1BO43795 1136 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 RCSD1Q6JBY9 416 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 KANK3Q6NY19 840 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 ENOX1Q8TC92 643 aaKnown RBP16.68■□□□□ 0.26
CRTC3-210ENST00000560927 ARHGEF1Q92888 912 aaKnown RBP16.68■□□□□ 0.26
CRTC3-210ENST00000560927 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 SAMSN1Q9NSI8 373 aaKnown RBP16.68■□□□□ 0.26
CRTC3-210ENST00000560927 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
CRTC3-210ENST00000560927 ARPP21Q9UBL0 812 aaPredicted RBP16.68■□□□□ 0.26
CRTC3-210ENST00000560927 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.68■□□□□ 0.26
CRTC3-210ENST00000560927 V9GYY5 206 aaPredicted RBP16.68■□□□□ 0.26
CRTC3-210ENST00000560927 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 VPS72Q15906 364 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 TTC38Q5R3I4 469 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 TRIML1Q8N9V2 468 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 MORC2Q9Y6X9 1032 aaPredicted RBP16.67■□□□□ 0.26
CRTC3-210ENST00000560927 NRDCO43847 1150 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 DHX8Q14562 1220 aaKnown RBP16.67■□□□□ 0.26
CRTC3-210ENST00000560927 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
CRTC3-210ENST00000560927 CCNL1Q9UK58 526 aaPredicted RBP16.67■□□□□ 0.26
CRTC3-210ENST00000560927 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 SLFN14P0C7P3 912 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 SCG2P13521 617 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 PTGDRQ13258 359 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
CRTC3-210ENST00000560927 TMEM139Q8IV31 216 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 DACH1Q9UI36 760 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
CRTC3-210ENST00000560927 LAMB1P07942 1786 aa16.66■□□□□ 0.26
CRTC3-210ENST00000560927 KIF2AO00139 706 aaPredicted RBP16.65■□□□□ 0.26
CRTC3-210ENST00000560927 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
CRTC3-210ENST00000560927 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms