RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
ZEB1-220ENST00000560909 ZAP70P43403 619 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 RGS3P49796 1198 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 GUCA2AQ02747 115 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 CBLBQ13191 982 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 PTPRNQ16849 979 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 TTC39AQ5SRH9 613 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 GORABQ5T7V8 394 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 STRIP1Q5VSL9 837 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.64□□□□□ -1.35
ZEB1-220ENST00000560909 KBTBD3Q8NAB2 608 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 WDR66Q8TBY9 1149 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 GMLQ99445 158 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 BOLA2Q9H3K6 86 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 ZNF277Q9NRM2 450 aaPredicted RBP6.64□□□□□ -1.35
ZEB1-220ENST00000560909 PAG1Q9NWQ8 432 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 ZNRF3Q9ULT6 936 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 PPIP5K2O43314 1243 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 GRIN3BO60391 1043 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
ZEB1-220ENST00000560909 HOXB4P17483 251 aaPredicted RBP6.63□□□□□ -1.35
ZEB1-220ENST00000560909 COL4A5P29400 1685 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 MMP14P50281 582 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
ZEB1-220ENST00000560909 AOC3Q16853 763 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 FER1L6Q2WGJ9 1857 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 DACT2Q5SW24 774 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 PI16Q6UXB8 463 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
ZEB1-220ENST00000560909 RNF217Q8TC41 542 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 ZNF384Q8TF68 577 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 TBC1D22AQ8WUA7 517 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 INSM2Q96T92 566 aaPredicted RBP6.63□□□□□ -1.35
ZEB1-220ENST00000560909 ANTXR1Q9H6X2 564 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 PIH1D3Q9NQM4 214 aaKnown RBP6.63□□□□□ -1.35
ZEB1-220ENST00000560909 AKAP11Q9UKA4 1901 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 ARFGEF1Q9Y6D6 1849 aa6.63□□□□□ -1.35
ZEB1-220ENST00000560909 ZC3H4Q9UPT8 1303 aaKnown RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 TCRBV5S4A2TA0A5A2 114 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 USP17L3A6NCW0 530 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 USP17L4A6NCW7 530 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 GOLIM4O00461 696 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 ECE2O60344 883 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 ZFYP08048 801 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 LMNB1P20700 586 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 CHMLP26374 656 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 HDLBPQ00341 1268 aaKnown RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 UBE3CQ15386 1083 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 TTLL5Q6EMB2 1281 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 VPS37DQ86XT2 251 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 CNTROBQ8N137 903 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 LARGE2Q8N3Y3 721 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 CERS5Q8N5B7 392 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 EDC3Q96F86 508 aaKnown RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 GMCL1Q96IK5 515 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 POLMQ9NP87 494 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 KCNQ5Q9NR82 932 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 NOP53Q9NZM5 478 aaKnown RBP6.62□□□□□ -1.35
ZEB1-220ENST00000560909 SPEF2Q9C093 1822 aa6.62□□□□□ -1.35
ZEB1-220ENST00000560909 GAKO14976 1311 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 HIP1O00291 1037 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 RNF113AO15541 343 aaKnown RBP6.61□□□□□ -1.35
ZEB1-220ENST00000560909 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
ZEB1-220ENST00000560909 ADD2P35612 726 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 GTF2IP78347 998 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 CXCL9Q07325 125 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 GRIK5Q16478 980 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 LRRFIP1Q32MZ4 808 aaKnown RBP6.61□□□□□ -1.35
ZEB1-220ENST00000560909 C8orf34Q49A92 452 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 SPTY2D1Q68D10 685 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-220ENST00000560909 TBC1D9Q6ZT07 1266 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 ARHGAP27Q6ZUM4 889 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 Q6ZVU0 165 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 NIM1KQ8IY84 436 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 AGBL3Q8NEM8 1001 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 NSUN4Q96CB9 384 aaKnown RBP6.61□□□□□ -1.35
ZEB1-220ENST00000560909 DBNDD1Q9H9R9 158 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 IQSEC3Q9UPP2 1182 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-220ENST00000560909 NDUFB9Q9Y6M9 179 aa6.61□□□□□ -1.35
ZEB1-220ENST00000560909 MYO3BQ8WXR4 1341 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 IRF6O14896 467 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 SGSM2O43147 1006 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 HOXA2O43364 376 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 CDC45O75419 566 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 PDE6AP16499 860 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 AMPD1P23109 780 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 RPS12P25398 132 aaKnown RBP6.6□□□□□ -1.35
ZEB1-220ENST00000560909 PRDX5P30044 214 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 ZNF280AP59817 542 aaPredicted RBP6.6□□□□□ -1.35
ZEB1-220ENST00000560909 USP46P62068 366 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 ZSCAN25Q6NSZ9 544 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 RSBN1LQ6PCB5 846 aaPredicted RBP6.6□□□□□ -1.35
ZEB1-220ENST00000560909 HHIPL2Q6UWX4 724 aa6.6□□□□□ -1.35
ZEB1-220ENST00000560909 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms