RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 BCRP11274 1271 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 CLEC10AQ8IUN9 316 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 C12orf42Q96LP6 360 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 PARK7Q99497 189 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 MCOLN1Q9GZU1 580 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 IL25Q9H293 177 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 CPA4Q9UI42 421 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 TACC3Q9Y6A5 838 aa18.23■□□□□ 0.51
SNRPA1-213ENST00000560856 HIP1O00291 1037 aa18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 MPHOSPH10O00566 681 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 FGAP02671 866 aa18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 PPARAQ07869 468 aa18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 USP17L2Q6R6M4 530 aa18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 CWC27Q6UX04 472 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 STK11IPQ8N1F8 1099 aa18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 CD99L2Q8TCZ2 262 aa18.22■□□□□ 0.51
SNRPA1-213ENST00000560856 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 DIAPH3Q9NSV4 1193 aa18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 TMOD4Q9NZQ9 345 aa18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 ANAPC4Q9UJX5 808 aa18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 MYH8P13535 1937 aa18.21■□□□□ 0.51
SNRPA1-213ENST00000560856 GREB1LQ9C091 1923 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 PRDM1O75626 825 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 CTGFP29279 349 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 OTOP1Q7RTM1 612 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 ERO1AQ96HE7 468 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 MKNK2Q9HBH9 465 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 ZMYM6O95789 1325 aa18.2■□□□□ 0.5
SNRPA1-213ENST00000560856 NEFLP07196 543 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 FGRP09769 529 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 CHMLP26374 656 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 USP14P54578 494 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 LACTBP83111 547 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 CTDSPL2Q05D32 466 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 ZYXQ15942 572 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 POTEEQ6S8J3 1075 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 FEZ1Q99689 392 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 ARHGAP39Q9C0H5 1083 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 KANSL2Q9H9L4 492 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
SNRPA1-213ENST00000560856 EEF2P13639 858 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 MFAP1P55081 439 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 ICA1Q05084 483 aa18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 ABHD8Q96I13 439 aa18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 P2RX7Q99572 595 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 PNMA3Q9UL41 463 aa18.18■□□□□ 0.5
SNRPA1-213ENST00000560856 VCAM1P19320 739 aa18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 OSBPP22059 807 aa18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 PDE4BQ07343 736 aa18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 PKN2Q16513 984 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 ZNF444Q8N0Y2 327 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 NBPF3Q9H094 633 aa18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 EFCC1Q9HA90 598 aa18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 TRIM17Q9Y577 477 aa18.17■□□□□ 0.5
SNRPA1-213ENST00000560856 HTTP42858 3142 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 SLC3A2P08195 630 aaKnown RBP18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 CATSPERGQ6ZRH7 1159 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 NEDD1Q8NHV4 660 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 SMCR8Q8TEV9 937 aaPredicted RBP18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 DSCC1Q9BVC3 393 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 ZNF287Q9HBT7 754 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 NYAP2Q9P242 653 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 PLIN4Q96Q06 1357 aa18.16■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 ORC4O43929 436 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 GCLCP48506 637 aaPredicted RBP18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 HERVK_113P62684 666 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 IRX3P78415 501 aaPredicted RBP18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 FAM47AQ5JRC9 791 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 FBXO46Q6PJ61 603 aaPredicted RBP18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 TRIM47Q96LD4 638 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
SNRPA1-213ENST00000560856 PEX10O60683 326 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 PSMC4P43686 418 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 HAND2P61296 217 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 TFAP4Q01664 338 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 NKX2-3Q8TAU0 364 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms