RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 FSTL1Q12841 308 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 COL9A3Q14050 684 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 RRP1BQ14684 758 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 MAP3K11Q16584 847 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 IMMTQ16891 758 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 SHROOM1Q2M3G4 852 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 TATDN1Q6P1N9 297 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 MIGA2Q7L4E1 593 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 AMOTL1Q8IY63 956 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 PDCD7Q8N8D1 485 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 SWAP70Q9UH65 585 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 E7EWF7 191 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 ORC4O43929 436 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 PRDM1O75626 825 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 CDK8P49336 464 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 JAG1P78504 1218 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 DSG2Q14126 1118 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 SUPT20HL1Q3ZLR7 823 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 AKNAD1Q5T1N1 836 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 CST9Q5W186 159 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 DCAF15Q66K64 600 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 MOB2Q70IA6 237 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 FOXP4Q8IVH2 680 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 STK11IPQ8N1F8 1099 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 CRACR2BQ8N4Y2 399 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 HOOK2Q96ED9 719 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 ZNF341Q9BYN7 854 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 INCENPQ9NQS7 918 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 SNX14Q9Y5W7 946 aa8.34□□□□□ -1.07
CTDSPL2-210ENST00000560834 SPDYE16A6NNV3 312 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 EIF5BO60841 1220 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 CELF2O95319 508 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 GDF11O95390 407 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 PCP11498 1178 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 AKR1B1P15121 316 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 INPP5BP32019 993 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 NF2P35240 595 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 RBM25P49756 843 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 FOXK1P85037 733 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 PDE4BQ07343 736 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 PRKG1Q13976 671 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 ADCK5Q3MIX3 580 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 NOL9Q5SY16 702 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 RNF20Q5VTR2 975 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 WRNIP1Q96S55 665 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 GBA2Q9HCG7 927 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 SNCAIPQ9Y6H5 919 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 PARP14Q460N5 1801 aa8.33□□□□□ -1.08
CTDSPL2-210ENST00000560834 IGKV6D-41A0A0C4DH26 115 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 B4E1Z4 1266 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 DPYSL4O14531 572 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 SLC3A2P08195 630 aaKnown RBP8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 MCCP23508 829 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 GUCY1A2P33402 732 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 CAP2P40123 477 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 FKBP1BP68106 108 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 VGLL4Q14135 290 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 LDLRAD1Q5T700 205 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 CLEC10AQ8IUN9 316 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 MB21D2Q8IYB1 491 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 TMC2Q8TDI7 906 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 CLMNQ96JQ2 1002 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 TBC1D32Q96NH3 1257 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 KIF2CQ99661 725 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 TRIM34Q9BYJ4 488 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 RNF41Q9H4P4 317 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 ANGEL1Q9UNK9 670 aaKnown RBP8.32□□□□□ -1.08
CTDSPL2-210ENST00000560834 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 KDM4AO75164 1064 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 GH2P01242 217 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 ZKSCAN1P17029 563 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 IREB2P48200 963 aaKnown RBP8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 NOVP48745 357 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 NT5C2P49902 561 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 ANTXR2P58335 489 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 ANAPC15P60006 121 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 ABCB5Q2M3G0 1257 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 CERKLQ49MI3 558 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 RRP12Q5JTH9 1297 aaKnown RBP8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 ARMC9Q7Z3E5 817 aa8.31□□□□□ -1.08
CTDSPL2-210ENST00000560834 CCDC84Q86UT8 332 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms