RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
TRAF3-209ENST00000560463 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 MICU3Q86XE3 530 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 FANCBQ8NB91 859 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-209ENST00000560463 KAT14Q9H8E8 782 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 SENP2Q9HC62 589 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
TRAF3-209ENST00000560463 HACL1Q9UJ83 578 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 PAPPA2Q9BXP8 1791 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 PITPNM2Q9BZ72 1349 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 WDR33Q9C0J8 1336 aaKnown RBP10.05□□□□□ -0.8
TRAF3-209ENST00000560463 IGKV6D-41A0A0C4DH26 115 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 SHTN1A0MZ66 631 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 STX6O43752 255 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 NMT2O60551 498 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 DDNO94850 711 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-209ENST00000560463 CTDNEP1O95476 244 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 TOP1P11387 765 aaKnown RBP10.04□□□□□ -0.8
TRAF3-209ENST00000560463 IFNAR1P17181 557 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 KIF5BP33176 963 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 TROAPQ12815 778 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 RTN1Q16799 776 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 LARP1BQ659C4 914 aaKnown RBP10.04□□□□□ -0.8
TRAF3-209ENST00000560463 FAM184AQ8NB25 1140 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 CTCFLQ8NI51 663 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-209ENST00000560463 DNAJC18Q9H819 358 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRAF3-209ENST00000560463 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
TRAF3-209ENST00000560463 MTMR4Q9NYA4 1195 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 PGAP2Q9UHJ9 254 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 STX8Q9UNK0 236 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 PPP2R3BQ9Y5P8 575 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
TRAF3-209ENST00000560463 COL11A1P12107 1806 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-209ENST00000560463 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 BRD1O95696 1058 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 TTLL1O95922 423 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 EGFRP00533 1210 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 AKR1B1P15121 316 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 SYT1P21579 422 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 CDC27P30260 824 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 ADD1P35611 737 aaKnown RBP10.03□□□□□ -0.8
TRAF3-209ENST00000560463 EPS15P42566 896 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 RASA3Q14644 834 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 NTRK3Q16288 839 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 TMEM179Q6ZVK1 233 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 MKL1Q969V6 931 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 CEP95Q96GE4 821 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 TMEM47Q9BQJ4 181 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 TMEM39BQ9GZU3 492 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-209ENST00000560463 GINM1Q9NU53 330 aa10.03□□□□□ -0.8
TRAF3-209ENST00000560463 SMCHD1A6NHR9 2005 aa10.02□□□□□ -0.8
TRAF3-209ENST00000560463 GLTPD2A6NH11 291 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 MPHOSPH10O00566 681 aaKnown RBP10.02□□□□□ -0.81
TRAF3-209ENST00000560463 JAK2O60674 1132 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 GNAQP50148 359 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 SSRP1Q08945 709 aaKnown RBP10.02□□□□□ -0.81
TRAF3-209ENST00000560463 ABCB5Q2M3G0 1257 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 CLEC17AQ6ZS10 378 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 USP50Q70EL3 339 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-209ENST00000560463 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 NUP133Q8WUM0 1156 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 WASF1Q92558 559 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 TEPSINQ96N21 525 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 LZTS2Q9BRK4 669 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 MYL10Q9BUA6 226 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRAF3-209ENST00000560463 DEFB129Q9H1M3 183 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 NYAP2Q9P242 653 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
TRAF3-209ENST00000560463 SYNPO2Q9UMS6 1093 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 ATP6V1DQ9Y5K8 247 aa10.02□□□□□ -0.81
TRAF3-209ENST00000560463 RBBP6Q7Z6E9 1792 aaKnown RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 IQCA1LA6NCM1 817 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 FMNL1O95466 1100 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 ZSCAN22P10073 491 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 RXRAP19793 462 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 SMARCA1P28370 1054 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 GRM4Q14833 912 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 ANGEL2Q5VTE6 544 aaKnown RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 DCAF15Q66K64 600 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 CCDC144CPQ8IYA2 1237 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 TRPM4Q8TD43 1214 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 TNPO1Q92973 898 aaKnown RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 RNF26Q9BY78 433 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 ORC3Q9UBD5 711 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-209ENST00000560463 ZDHHC9Q9Y397 364 aa10.01□□□□□ -0.81
TRAF3-209ENST00000560463 MYH7BA7E2Y1 1941 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 DCAF8L1A6NGE4 600 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 FAM196BA6NMK8 535 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 H3BQV1 296 aa10□□□□□ -0.81
TRAF3-209ENST00000560463 PRPF3O43395 683 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms