RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 PEX10O60683 326 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 GRK4P32298 578 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 TRHRP34981 398 aaPredicted RBP5.89□□□□□ -1.47
SPG11-222ENST00000560435 ETV3P41162 512 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 DLG4P78352 724 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 TRIT1Q9H3H1 467 aaKnown RBP5.89□□□□□ -1.47
SPG11-222ENST00000560435 ZCCHC4Q9H5U6 513 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 TACC3Q9Y6A5 838 aa5.89□□□□□ -1.47
SPG11-222ENST00000560435 A0A0G2JLL6 359 aaPredicted RBP5.88□□□□□ -1.47
SPG11-222ENST00000560435 WASH4PA8MWX3 477 aa5.88□□□□□ -1.47
SPG11-222ENST00000560435 RBAK-RBAKDNI3L0D1 243 aa5.88□□□□□ -1.47
SPG11-222ENST00000560435 TPP2P29144 1249 aaPredicted RBP5.88□□□□□ -1.47
SPG11-222ENST00000560435 CDK8P49336 464 aa5.88□□□□□ -1.47
SPG11-222ENST00000560435 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
SPG11-222ENST00000560435 Q96M66 194 aa5.88□□□□□ -1.47
SPG11-222ENST00000560435 DUSP15Q9H1R2 295 aaPredicted RBP5.88□□□□□ -1.47
SPG11-222ENST00000560435 MYOCOSA0A1B0GUC4 107 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 FOXD2O60548 495 aaPredicted RBP5.87□□□□□ -1.47
SPG11-222ENST00000560435 ZGLP1P0C6A0 271 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 BMP7P18075 431 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 NR0B2Q15466 257 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 SV2BQ7L1I2 683 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 OXR1Q8N573 874 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 INTS4Q96HW7 963 aaKnown RBP5.87□□□□□ -1.47
SPG11-222ENST00000560435 KCNC2Q96PR1 638 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 C19orf44Q9H6X5 657 aa5.87□□□□□ -1.47
SPG11-222ENST00000560435 CWC22Q9HCG8 908 aaKnown RBP5.87□□□□□ -1.47
SPG11-222ENST00000560435 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 FITM1A5D6W6 292 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 GFRA2O00451 464 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 EGR3Q06889 387 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 ALG1LQ6GMV1 187 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 ZNF605Q86T29 641 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 DNAJB8Q8NHS0 232 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 GPR62Q9BZJ7 368 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 C12orf49Q9H741 205 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 FAM8A1Q9UBU6 413 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 BIN2Q9UBW5 565 aaPredicted RBP5.86□□□□□ -1.47
SPG11-222ENST00000560435 TJP2Q9UDY2 1190 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 DUSP13Q9UII6 198 aa5.86□□□□□ -1.47
SPG11-222ENST00000560435 CNOT6Q9ULM6 557 aaKnown RBP5.86□□□□□ -1.47
SPG11-222ENST00000560435 YBX2Q9Y2T7 364 aaKnown RBP5.86□□□□□ -1.47
SPG11-222ENST00000560435 USP17L7P0C7H9 530 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 MAPK1P28482 360 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 FMR1Q06787 632 aaKnown RBP eCLIP5.85□□□□□ -1.47
SPG11-222ENST00000560435 TIGD5Q53EQ6 642 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 ZNF385BQ569K4 471 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 TCERG1LQ5VWI1 586 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 SLC6A19Q695T7 634 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 TTBK2Q6IQ55 1244 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 DHX38Q92620 1227 aaKnown RBP5.85□□□□□ -1.47
SPG11-222ENST00000560435 TMEM87BQ96K49 555 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 DPH2Q9BQC3 489 aaPredicted RBP5.85□□□□□ -1.47
SPG11-222ENST00000560435 ZNF552Q9H707 407 aaPredicted RBP5.85□□□□□ -1.47
SPG11-222ENST00000560435 GCM1Q9NP62 436 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 GPATCH2Q9NW75 528 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 SPG7Q9UQ90 795 aa5.85□□□□□ -1.47
SPG11-222ENST00000560435 RFXAPO00287 272 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 SYN1P17600 705 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 MAPK8P45983 427 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 RPS26P62854 115 aaKnown RBP5.84□□□□□ -1.47
SPG11-222ENST00000560435 NFIXQ14938 502 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 TSPYL5Q86VY4 417 aaPredicted RBP5.84□□□□□ -1.47
SPG11-222ENST00000560435 TMEM151BQ8IW70 566 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
SPG11-222ENST00000560435 SETDB2Q96T68 719 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 RTEL1Q9NZ71 1219 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 KCTD3Q9Y597 815 aa5.84□□□□□ -1.47
SPG11-222ENST00000560435 PGRP06401 933 aa5.83□□□□□ -1.48
SPG11-222ENST00000560435 SNX17Q15036 470 aa5.83□□□□□ -1.48
SPG11-222ENST00000560435 DBX2Q6ZNG2 339 aa5.83□□□□□ -1.48
SPG11-222ENST00000560435 DTWD2Q8NBA8 298 aa5.83□□□□□ -1.48
SPG11-222ENST00000560435 TTF2Q9UNY4 1162 aaKnown RBP5.83□□□□□ -1.48
SPG11-222ENST00000560435 CEP131Q9UPN4 1083 aa5.83□□□□□ -1.48
SPG11-222ENST00000560435 TRIM13O60858 407 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 LTKP29376 864 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 CHRNEQ04844 493 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 SEPT6Q14141 434 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 TMEM132EQ6IEE7 984 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 SPPL2CQ8IUH8 684 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 MCATQ8IVS2 390 aaKnown RBP5.82□□□□□ -1.48
SPG11-222ENST00000560435 CXorf38Q8TB03 319 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 KCNH3Q9ULD8 1083 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 PCDHA11Q9Y5I1 949 aa5.82□□□□□ -1.48
SPG11-222ENST00000560435 LMNB1P20700 586 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 PDE6BP35913 854 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 ATP2B2Q01814 1243 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 PDE4BQ07343 736 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 PDE4CQ08493 712 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 PPP1R13LQ8WUF5 828 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 SYTL4Q96C24 671 aaPredicted RBP5.81□□□□□ -1.48
SPG11-222ENST00000560435 ADAM30Q9UKF2 790 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 WWC3Q9ULE0 1092 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 GNEQ9Y223 722 aaKnown RBP5.81□□□□□ -1.48
SPG11-222ENST00000560435 PCDHB5Q9Y5E4 795 aa5.81□□□□□ -1.48
SPG11-222ENST00000560435 DUSP4Q13115 394 aa5.8□□□□□ -1.48
SPG11-222ENST00000560435 SSPNQ14714 243 aa5.8□□□□□ -1.48
SPG11-222ENST00000560435 ANKS4BQ8N8V4 417 aa5.8□□□□□ -1.48
SPG11-222ENST00000560435 ACSF2Q96CM8 615 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms