RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
SMAD3-214ENST00000560402 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 CCAR1Q8IX12 1150 aaKnown RBP16.42■□□□□ 0.22
SMAD3-214ENST00000560402 TRIB2Q92519 343 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 TXNRD2Q9NNW7 524 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
SMAD3-214ENST00000560402 A0A1W2PPC1 479 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 IFIT2P09913 472 aaKnown RBP16.41■□□□□ 0.22
SMAD3-214ENST00000560402 PDE6AP16499 860 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 RGS2P41220 211 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 CCNA1P78396 465 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 MAP3K21Q5TCX8 1036 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 APBA2Q99767 749 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 RBPJLQ9UBG7 517 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 RABGAP1Q9Y3P9 1069 aa16.41■□□□□ 0.22
SMAD3-214ENST00000560402 GLRX3O76003 335 aaKnown RBP16.4■□□□□ 0.22
SMAD3-214ENST00000560402 POLR3DP05423 398 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-214ENST00000560402 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-214ENST00000560402 VCAM1P19320 739 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 SHMT1P34896 483 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 GABPAQ06546 454 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 SLC9C2Q5TAH2 1124 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 PAWRQ96IZ0 340 aaKnown RBP16.4■□□□□ 0.22
SMAD3-214ENST00000560402 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
SMAD3-214ENST00000560402 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
SMAD3-214ENST00000560402 BAZ2AQ9UIF9 1905 aaKnown RBP16.39■□□□□ 0.21
SMAD3-214ENST00000560402 CYP2B6P20813 491 aa16.39■□□□□ 0.21
SMAD3-214ENST00000560402 PLEKHH3Q7Z736 793 aa16.39■□□□□ 0.21
SMAD3-214ENST00000560402 USP6NLQ92738 828 aa16.39■□□□□ 0.21
SMAD3-214ENST00000560402 DNAJC2Q99543 621 aaKnown RBP16.39■□□□□ 0.21
SMAD3-214ENST00000560402 PORCNQ9H237 461 aa16.39■□□□□ 0.21
SMAD3-214ENST00000560402 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
SMAD3-214ENST00000560402 OGDHLQ9ULD0 1010 aa16.39■□□□□ 0.21
SMAD3-214ENST00000560402 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
SMAD3-214ENST00000560402 RANBP2P49792 3224 aaKnown RBP16.38■□□□□ 0.21
SMAD3-214ENST00000560402 GOLIM4O00461 696 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
SMAD3-214ENST00000560402 PLCD1P51178 756 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 AAMPQ13685 434 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 ZYXQ15942 572 aaKnown RBP16.38■□□□□ 0.21
SMAD3-214ENST00000560402 MORN1Q5T089 497 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 NBPF3Q9H094 633 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 SWAP70Q9UH65 585 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
SMAD3-214ENST00000560402 TCRBV5S4A2TA0A5A2 114 aa16.37■□□□□ 0.21
SMAD3-214ENST00000560402 TRIM32Q13049 653 aa16.37■□□□□ 0.21
SMAD3-214ENST00000560402 MAP2K5Q13163 448 aa16.37■□□□□ 0.21
SMAD3-214ENST00000560402 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
SMAD3-214ENST00000560402 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMAD3-214ENST00000560402 PAG1Q9NWQ8 432 aa16.37■□□□□ 0.21
SMAD3-214ENST00000560402 RLFQ13129 1914 aa16.37■□□□□ 0.21
SMAD3-214ENST00000560402 APBB1O00213 710 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 Q3C1V9 767 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 TMEM179Q6ZVK1 233 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 SIRT2Q8IXJ6 389 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 ACER1Q8TDN7 264 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 DIS3LQ8TF46 1054 aaKnown RBP16.36■□□□□ 0.21
SMAD3-214ENST00000560402 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
SMAD3-214ENST00000560402 ATP8A2Q9NTI2 1148 aa16.36■□□□□ 0.21
SMAD3-214ENST00000560402 SLC15A5A6NIM6 579 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 SPDYE16A6NNV3 312 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-214ENST00000560402 PEX10O60683 326 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 CNMDO75829 334 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 ATP5JP18859 108 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 ADD2P35612 726 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 SEPT2Q15019 361 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 RPAP3Q9H6T3 665 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-214ENST00000560402 SH2D4AQ9H788 454 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 IVNS1ABPQ9Y6Y0 642 aa16.35■□□□□ 0.21
SMAD3-214ENST00000560402 MPHOSPH10O00566 681 aaKnown RBP16.34■□□□□ 0.21
SMAD3-214ENST00000560402 HOXC6P09630 235 aa16.34■□□□□ 0.21
SMAD3-214ENST00000560402 CACNB2Q08289 660 aaPredicted RBP16.34■□□□□ 0.21
SMAD3-214ENST00000560402 MFSD14CQ5VZR4 134 aa16.34■□□□□ 0.21
SMAD3-214ENST00000560402 POTEEQ6S8J3 1075 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms