RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CCL5P13501 91 aa18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 SHMT1P34896 483 aa18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 PDE1AP54750 535 aa18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 SHROOM1Q2M3G4 852 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 OSBP2Q969R2 916 aa18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 COA7Q96BR5 231 aa18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 STRBPQ96SI9 672 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
SNRPA1-210ENST00000560383 USP17L10C9JJH3 530 aa18.24■□□□□ 0.51
SNRPA1-210ENST00000560383 GDF11O95390 407 aa18.24■□□□□ 0.51
SNRPA1-210ENST00000560383 NUCB1Q02818 461 aa18.24■□□□□ 0.51
SNRPA1-210ENST00000560383 EVX2Q03828 476 aa18.24■□□□□ 0.51
SNRPA1-210ENST00000560383 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
SNRPA1-210ENST00000560383 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-210ENST00000560383 GH2P01242 217 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 CERKLQ49MI3 558 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 C12orf60Q5U649 245 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 GIMAP6Q6P9H5 292 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 RNF208Q9H0X6 261 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 PLXNB2O15031 1838 aa18.23■□□□□ 0.51
SNRPA1-210ENST00000560383 MYH7P12883 1935 aa18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 CYP2D6P10635 497 aa18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 UBE2Q1Q7Z7E8 422 aa18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 GTF3C2Q8WUA4 911 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 SWAP70Q9UH65 585 aa18.22■□□□□ 0.51
SNRPA1-210ENST00000560383 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 USP17L12C9JPN9 530 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 USP17L21D6R901 530 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 INHAP05111 366 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 ELNP15502 786 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 ABCB5Q2M3G0 1257 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 ZMYM1Q5SVZ6 1142 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 EVI5LQ96CN4 794 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 C12orf42Q96LP6 360 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 FSD1Q9BTV5 496 aa18.21■□□□□ 0.51
SNRPA1-210ENST00000560383 GPAA1O43292 621 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 GNAT2P19087 354 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 GUCY1A2P33402 732 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 HERVK_113P62684 666 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 SBK1Q52WX2 424 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 CTR9Q6PD62 1173 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 U2AF1L4Q8WU68 220 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 UNC93B1Q9H1C4 597 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 PAK6Q9NQU5 681 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-210ENST00000560383 M0R2C6 588 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 USP17L2Q6R6M4 530 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 C16orf86Q6ZW13 317 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 AMOTL1Q8IY63 956 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 CABP5Q9NP86 173 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 MYH8P13535 1937 aa18.19■□□□□ 0.5
SNRPA1-210ENST00000560383 CEP290O15078 2479 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 CYP2D7A0A087X1C5 515 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 SGPL1O95470 568 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 USP14P54578 494 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 PLEKHM2Q8IWE5 1019 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 KIAA1683Q9H0B3 1180 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 EMILIN3Q9NT22 766 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 GJD2Q9UKL4 321 aa18.18■□□□□ 0.5
SNRPA1-210ENST00000560383 RANBP2P49792 3224 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 PATL2C9JE40 543 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 HMGCRP04035 888 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 CDK8P49336 464 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 HABP4Q5JVS0 413 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 SOCS4Q8WXH5 440 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 CCDC17Q96LX7 622 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 P2RX7Q99572 595 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 FEZ1Q99689 392 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 HTATIP2Q9BUP3 242 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 EPB41L4AQ9HCS5 686 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SNRPA1-210ENST00000560383 FARP2O94887 1054 aaPredicted RBP18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 MAPK4P31152 587 aa18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 SEPT2Q15019 361 aa18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 TMEM179Q6ZVK1 233 aa18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 ACER1Q8TDN7 264 aa18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 CRISPLD2Q9H0B8 497 aa18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 TXNRD2Q9NNW7 524 aa18.16■□□□□ 0.5
SNRPA1-210ENST00000560383 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
SNRPA1-210ENST00000560383 ERVK-9P63128 1117 aa18.15■□□□□ 0.5
SNRPA1-210ENST00000560383 ERVK-24P63145 666 aa18.15■□□□□ 0.5
SNRPA1-210ENST00000560383 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms