RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 KCNJ14Q9UNX9 436 aa14.99□□□□□ -0.01
TRAF3-208ENST00000560371 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
TRAF3-208ENST00000560371 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 ZWINTO95229 277 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 BCRP11274 1271 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 MCTP2Q6DN12 878 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 IGSF22Q8N9C0 903 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 IFT81Q8WYA0 676 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAF3-208ENST00000560371 KDM5CP41229 1560 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 MYOM2P54296 1465 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 PRPF6O94906 941 aaKnown RBP14.98□□□□□ -0.01
TRAF3-208ENST00000560371 XDHP47989 1333 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 FRMPD2Q68DX3 1309 aaPredicted RBP14.98□□□□□ -0.01
TRAF3-208ENST00000560371 TNNI1P19237 187 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 IFNL3Q8IZI9 196 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 ZNF710Q8N1W2 664 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 TRPC6Q9Y210 931 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 SHROOM2Q13796 1616 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 OPA1O60313 960 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 TNNC1P63316 161 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 DCUN1D2Q6PH85 259 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 PNMA1Q8ND90 353 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 IWS1Q96ST2 819 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 PPEF1O14829 653 aaPredicted RBP14.98□□□□□ -0.01
TRAF3-208ENST00000560371 PDE6AP16499 860 aa14.98□□□□□ -0.01
TRAF3-208ENST00000560371 LRRC47Q8N1G4 583 aaKnown RBP14.98□□□□□ -0.01
TRAF3-208ENST00000560371 TRIM14Q14142 442 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 FAM204AQ9H8W3 233 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 ERCC5P28715 1186 aaPredicted RBP14.97□□□□□ -0.01
TRAF3-208ENST00000560371 CCDC26Q8TAB7 109 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 ZMYND15Q9H091 742 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 GREM2Q9H772 168 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 PDE8BO95263 885 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 ICA1Q05084 483 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 ARHGEF6Q15052 776 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 SLU7O95391 586 aaKnown RBP14.97□□□□□ -0.01
TRAF3-208ENST00000560371 P4HA1P13674 534 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 CD19P15391 556 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 ASIC2Q16515 512 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 ZSCAN10Q96SZ4 725 aaPredicted RBP14.97□□□□□ -0.01
TRAF3-208ENST00000560371 HAUS2Q9NVX0 235 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 KDM3AQ9Y4C1 1321 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 KRT40Q6A162 431 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 CABP7Q86V35 215 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 NCAPG2Q86XI2 1143 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 STK10O94804 968 aaKnown RBP14.97□□□□□ -0.01
TRAF3-208ENST00000560371 SEC24BO95487 1268 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 DEPTORQ8TB45 409 aa14.97□□□□□ -0.01
TRAF3-208ENST00000560371 KLRF2D3W0D1 207 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 FAM182BQ5T319 152 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 MLKLQ8NB16 471 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 PNMA2Q9UL42 364 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 KDM5DQ9BY66 1539 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 BTDP43251 543 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 MCF2L2Q86YR7 1114 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 GPR161Q8N6U8 529 aaKnown RBP14.96□□□□□ -0.01
TRAF3-208ENST00000560371 TTC14Q96N46 770 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 NUP58Q9BVL2 599 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 HECW2Q9P2P5 1572 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 ABCB5Q2M3G0 1257 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 MAP7D1Q3KQU3 841 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 SLC9C1Q4G0N8 1177 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 FBXO11Q86XK2 927 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 RIOK1Q9BRS2 568 aaKnown RBP14.96□□□□□ -0.01
TRAF3-208ENST00000560371 PLEKHG1Q9ULL1 1385 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 SMIM23A6NLE4 172 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 ANKS4BQ8N8V4 417 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 RNF169Q8NCN4 708 aa14.96□□□□□ -0.01
TRAF3-208ENST00000560371 GABPB2Q8TAK5 448 aaPredicted RBP14.96□□□□□ -0.01
TRAF3-208ENST00000560371 POSTNQ15063 836 aa14.96□□□□□ -0.02
TRAF3-208ENST00000560371 MIER3Q7Z3K6 550 aa14.96□□□□□ -0.02
TRAF3-208ENST00000560371 TLDC2A0PJX2 215 aa14.96□□□□□ -0.02
TRAF3-208ENST00000560371 UBL4BQ8N7F7 174 aa14.96□□□□□ -0.02
TRAF3-208ENST00000560371 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
TRAF3-208ENST00000560371 SH3BP5O60239 455 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 NR1I2O75469 434 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 NBPF3Q9H094 633 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 SERPINB2P05120 415 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 POLR2MP0CAP2 368 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 PSMC4P43686 418 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 FAM135BQ49AJ0 1406 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 BBOX1O75936 387 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 ERCC3P19447 782 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 SUPT20HL1Q3ZLR7 823 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 ARHGEF25Q86VW2 580 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 GEN1Q17RS7 908 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 PRR16Q569H4 304 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 ATRIPQ8WXE1 791 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 TBC1D31Q96DN5 1066 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 TMOD1P28289 359 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 KMT5BQ4FZB7 885 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 LRRC24Q50LG9 513 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 NSMCE1Q8WV22 266 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 CSRNP1Q96S65 589 aa14.95□□□□□ -0.02
TRAF3-208ENST00000560371 FAM173BQ6P4H8 233 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms