RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PARP3Q9Y6F1 533 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 PHLPP2Q6ZVD8 1323 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 RIMBP3CA6NJZ7 1639 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 RIMBP3BA6NNM3 1639 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 RIMBP3Q9UFD9 1639 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 MAP3K5Q99683 1374 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 FMN2Q9NZ56 1722 aa6.93□□□□□ -1.3
SNRPA1-209ENST00000560307 MYO5BQ9ULV0 1848 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 ALKQ9UM73 1620 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 GOLGA6L19H0YKK7 550 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 PNMA6AP0CW24 399 aaPredicted RBP6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 GJB2P29033 226 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 HNRNPH2P55795 449 aaKnown RBP6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 CCZ1BP86790 482 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 CCZ1P86791 482 aaPredicted RBP6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 ATP8B2P98198 1209 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 LRMPQ12912 555 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 ANKRD1Q15327 319 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 MTFR1Q15390 333 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 ELF2Q15723 593 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC93Q567U6 631 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC158Q5M9N0 1113 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 RUFY3Q7L099 469 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 CD163Q86VB7 1156 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 FCHSD1Q86WN1 690 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 AFAP1Q8N556 730 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 GOLGA5Q8TBA6 731 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 RUFY2Q8WXA3 655 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 FAM129BQ96TA1 746 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 LSG1Q9H089 658 aaKnown RBP6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 OSBPL5Q9H0X9 879 aaPredicted RBP6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 KLK14Q9P0G3 267 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 FHOD1Q9Y613 1164 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 CRB1P82279 1406 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 POGZQ7Z3K3 1410 aa6.92□□□□□ -1.3
SNRPA1-209ENST00000560307 MED1Q15648 1581 aaPredicted RBP6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 MEN1O00255 615 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 CDK2AP1O14519 115 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 RPS6KA5O75582 802 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 IVLP07476 585 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 ZNF165P49910 485 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 IQCB1Q15051 598 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 STX1AQ16623 288 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 C11orf91Q3C1V1 193 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 FAM26DQ5JW98 314 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 ARTNQ5T4W7 220 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 JAKMIP3Q5VZ66 844 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 ATL3Q6DD88 541 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 TMCO3Q6UWJ1 677 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 TMC4Q7Z404 712 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 TTC6Q86TZ1 520 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 LUZP1Q86V48 1076 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 ALDH16A1Q8IZ83 802 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 CNTROBQ8N137 903 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 EXOC4Q96A65 974 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 XAGE2Q96GT9 111 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 MYO19Q96H55 970 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 PHACTR3Q96KR7 559 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 UPF3BQ9BZI7 483 aaKnown RBP6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 ZNF446Q9NWS9 450 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 HYPKQ9NX55 129 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 TTC41PQ6P2S7 1318 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 DIP2AQ14689 1571 aa6.91□□□□□ -1.3
SNRPA1-209ENST00000560307 GOLGA6L4A6NEF3 574 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC69A6NI79 296 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 VGLL3A8MV65 326 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 HMGB1P09429 215 aaKnown RBP6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 SKILP12757 684 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 PCSK2P16519 638 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 LIG1P18858 919 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 MX2P20592 715 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 MZF1P28698 734 aaPredicted RBP6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 CASQ1P31415 396 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 NOS2P35228 1153 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 ZAP70P43403 619 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 MMP14P50281 582 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 TUBB4BP68371 445 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 DAB2P98082 770 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC144BQ3MJ40 725 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 FOXD4L6Q3SYB3 417 aaPredicted RBP6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 TMEM132EQ6IEE7 984 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 FOXD4L3Q6VB84 417 aaPredicted RBP6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 RIPOR1Q6ZS17 1223 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 ETFBKMTQ8IXQ9 262 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 FBXO18Q8NFZ0 1043 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 UBXN4Q92575 508 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 RNF34Q969K3 372 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 RILPL2Q969X0 211 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 NLRP3Q96P20 1036 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 BPIFA3Q9BQP9 254 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 PHACTR1Q9C0D0 580 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 ZNF395Q9H8N7 513 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms