RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 KIAA1683Q9H0B3 1180 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 TMOD4Q9NZQ9 345 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
RABGGTA-215ENST00000560207 CCL15-CCL14A0A0B4J2E2 113 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 TFAP4Q01664 338 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 PTH1RQ03431 593 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 ICA1Q05084 483 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 CTDSPL2Q05D32 466 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 SPP2Q13103 211 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 CCL15Q16663 113 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 USP17L2Q6R6M4 530 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 ANKRD23Q86SG2 305 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 SLC44A5Q8NCS7 719 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 FEZ1Q99689 392 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 CFHR5Q9BXR6 569 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 TOMM22Q9NS69 142 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 PNMA3Q9UL41 463 aa14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-215ENST00000560207 TTLL1O95922 423 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 AKR1B1P15121 316 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 RRP1BQ14684 758 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 SEPT2Q15019 361 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 TSGA10IPQ3SY00 556 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 RALYLQ86SE5 291 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 NCOA7Q8NI08 942 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 MKL1Q969V6 931 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 C12orf42Q96LP6 360 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 IL25Q9H293 177 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 GOPCQ9HD26 462 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 TMX2Q9Y320 296 aa14.23□□□□□ -0.13
RABGGTA-215ENST00000560207 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 AOC2O75106 756 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 CYP21A2P08686 494 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 GJA5P36382 358 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 HAND2P61296 217 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 NOM1Q5C9Z4 860 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 DGKHQ86XP1 1220 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
RABGGTA-215ENST00000560207 IGKV6D-41A0A0C4DH26 115 aa14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 PRDM1O75626 825 aa14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 GUCY1A2P33402 732 aa14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 RRP12Q5JTH9 1297 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 IL27Q8NEV9 243 aa14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 WBP1LQ9NX94 342 aa14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.13
RABGGTA-215ENST00000560207 ERICH2A1L162 156 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 SLURP2P0DP57 97 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 OSBPP22059 807 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 HOXA7P31268 230 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 NOVP48745 357 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 MKRN3Q13064 507 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 MTMR2Q13614 643 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 CREB3L3Q68CJ9 461 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 RCSD1Q6JBY9 416 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 TBC1D10CQ8IV04 446 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 STK11IPQ8N1F8 1099 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 PARK7Q99497 189 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 UBAC1Q9BSL1 405 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-215ENST00000560207 WDR19Q8NEZ3 1342 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 E7EWF7 191 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 SLC27A2O14975 620 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 KDM4AO75164 1064 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 TOP1P11387 765 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 PSMA5P28066 241 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 HSPA4P34932 840 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 HMGCS2P54868 508 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 JAG1P78504 1218 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 EVX2Q03828 476 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 GADL1Q6ZQY3 521 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 ANKS1AQ92625 1134 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 KCNB2Q92953 911 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 CEP95Q96GE4 821 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
RABGGTA-215ENST00000560207 MYPNQ86TC9 1320 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L15C9J2P7 530 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L13C9JLJ4 530 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L11C9JVI0 530 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L18D6R9N7 530 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L22D6RA61 530 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L17D6RBQ6 530 aa14.18□□□□□ -0.14
RABGGTA-215ENST00000560207 USP17L19D6RCP7 530 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms