RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 WDR78Q5VTH9 848 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 SH3RF1Q7Z6J0 888 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 FOXP4Q8IVH2 680 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 MAPKAPK5Q8IW41 473 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 PDLIM7Q9NR12 457 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 AATFQ9NY61 560 aaKnown RBP eCLIP15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 RAPGEFL1Q9UHV5 662 aa15.8■□□□□ 0.12
RABGGTA-213ENST00000560127 CHD7Q9P2D1 2997 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 FLT1P17948 1338 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 TRIM43BA6NCK2 446 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 TJAP1Q5JTD0 557 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 TGFBRAP1Q8WUH2 860 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 TRIM43Q96BQ3 446 aaPredicted RBP15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 C12orf42Q96LP6 360 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 NEUROD6Q96NK8 337 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 PALD1Q9ULE6 856 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 PLXNA1Q9UIW2 1896 aa15.79■□□□□ 0.12
RABGGTA-213ENST00000560127 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L15C9J2P7 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L13C9JLJ4 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L11C9JVI0 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L18D6R9N7 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L22D6RA61 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L17D6RBQ6 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L19D6RCP7 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L20D6RJB6 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 TNFRSF10AO00220 468 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 MCAMP43121 646 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 PPP4CP60510 307 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 USP17L24Q0WX57 530 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 ANO1Q5XXA6 986 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 CATSPERGQ6ZRH7 1159 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 ARRDC4Q8NCT1 418 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 NOL10Q9BSC4 688 aaKnown RBP15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 BTBD7Q9P203 1132 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 LRP2BPQ9P2M1 347 aa15.78■□□□□ 0.12
RABGGTA-213ENST00000560127 TCF20Q9UGU0 1960 aaKnown RBP15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 KBTBD13C9JR72 458 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 GH2P01242 217 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 ITGB8P26012 769 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 GRIN2CQ14957 1233 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 LBX2Q6XYB7 198 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 ADGRA1Q86SQ6 560 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 IVNS1ABPQ9Y6Y0 642 aa15.77■□□□□ 0.12
RABGGTA-213ENST00000560127 BAG3O95817 575 aa15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 PLCG2P16885 1265 aa15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 EPHB4P54760 987 aa15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 C1orf53Q5VUE5 145 aa15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 MEIS3Q99687 375 aa15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 SAP30BPQ9UHR5 308 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
RABGGTA-213ENST00000560127 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 SPDYE16A6NNV3 312 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 VCAM1P19320 739 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 ADCYAP1R1P41586 468 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 GORABQ5T7V8 394 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 OLFML2BQ68BL8 750 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 RNPC3Q96LT9 517 aaKnown RBP15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 FEZ1Q99689 392 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 PARP14Q460N5 1801 aa15.75■□□□□ 0.11
RABGGTA-213ENST00000560127 COL11A1P12107 1806 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 SEPT4O43236 478 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 TLE2Q04725 743 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 LRRC41Q15345 812 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 FAM9BQ8IZU0 186 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 ACER1Q8TDN7 264 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 GBF1Q92538 1859 aa15.74■□□□□ 0.11
RABGGTA-213ENST00000560127 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 ADORA2AP29274 412 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 USP14P54578 494 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 DPP9Q86TI2 863 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 KIAA1683Q9H0B3 1180 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 SNRKQ9NRH2 765 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 TRANK1O15050 2925 aa15.73■□□□□ 0.11
RABGGTA-213ENST00000560127 MYH8P13535 1937 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 E9PSI1 815 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 COBLO75128 1261 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 UQCRFS1P1P0C7P4 283 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 DNAJB2P25686 324 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 MTX1Q13505 466 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 PRAMEF19Q5SWL8 479 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 MOV10L1Q9BXT6 1211 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 RPAP3Q9H6T3 665 aaPredicted RBP15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 XIRP2A4UGR9 3374 aa15.72■□□□□ 0.11
RABGGTA-213ENST00000560127 PIEZO1Q92508 2521 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms