RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 KBTBD3Q8NAB2 608 aa24.64■■□□□ 1.54
CHRNA3-207ENST00000559941 TXNRD2Q9NNW7 524 aa24.64■■□□□ 1.54
CHRNA3-207ENST00000559941 RBPJLQ9UBG7 517 aa24.64■■□□□ 1.54
CHRNA3-207ENST00000559941 USP17L15C9J2P7 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L13C9JLJ4 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L11C9JVI0 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L18D6R9N7 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L22D6RA61 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L17D6RBQ6 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L19D6RCP7 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L20D6RJB6 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L24Q0WX57 530 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 C12orf60Q5U649 245 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 SLC44A5Q8NCS7 719 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 GPRC5AQ8NFJ5 357 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 NKX2-3Q8TAU0 364 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 DYNLL2Q96FJ2 89 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 RNF208Q9H0X6 261 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 GJD2Q9UKL4 321 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 SLC4A4Q9Y6R1 1079 aa24.63■■□□□ 1.53
CHRNA3-207ENST00000559941 MPHOSPH10O00566 681 aaKnown RBP24.62■■□□□ 1.53
CHRNA3-207ENST00000559941 TSHZ3Q63HK5 1081 aa24.62■■□□□ 1.53
CHRNA3-207ENST00000559941 SHISA4Q96DD7 197 aa24.62■■□□□ 1.53
CHRNA3-207ENST00000559941 DDRGK1Q96HY6 314 aa24.62■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L12C9JPN9 530 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 USP17L21D6R901 530 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 PEX10O60683 326 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 INHAP05111 366 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 GJA8P48165 433 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 CATSPERGQ6ZRH7 1159 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 TMEM179Q6ZVK1 233 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 AMOTL1Q8IY63 956 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 CRBNQ96SW2 442 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 TTC41PQ6P2S7 1318 aa24.61■■□□□ 1.53
CHRNA3-207ENST00000559941 VCAM1P19320 739 aa24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 ERVK-9P63128 1117 aa24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 ERVK-24P63145 666 aa24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 Q3C1V9 767 aa24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 POTEEQ6S8J3 1075 aa24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 YTHDC1Q96MU7 727 aaKnown RBP24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 STRBPQ96SI9 672 aaKnown RBP24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 UNC93B1Q9H1C4 597 aa24.6■■□□□ 1.53
CHRNA3-207ENST00000559941 CYP2D7A0A087X1C5 515 aa24.59■■□□□ 1.53
CHRNA3-207ENST00000559941 A0A1W2PRG0 241 aa24.59■■□□□ 1.53
CHRNA3-207ENST00000559941 CTR9Q6PD62 1173 aa24.59■■□□□ 1.53
CHRNA3-207ENST00000559941 APPBP2Q92624 585 aa24.59■■□□□ 1.53
CHRNA3-207ENST00000559941 PAGR1Q9BTK6 254 aa24.59■■□□□ 1.53
CHRNA3-207ENST00000559941 SMIM22K7EJ46 135 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 RNF113AO15541 343 aaKnown RBP24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 AKR1B1P15121 316 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 MAPK4P31152 587 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 CDK8P49336 464 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 C16orf86Q6ZW13 317 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 OSBP2Q969R2 916 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 CCDC17Q96LX7 622 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 RABGAP1Q9Y3P9 1069 aa24.58■■□□□ 1.53
CHRNA3-207ENST00000559941 ERC2O15083 957 aa24.57■■□□□ 1.52
CHRNA3-207ENST00000559941 ZFYP08048 801 aaPredicted RBP24.57■■□□□ 1.52
CHRNA3-207ENST00000559941 LBX2Q6XYB7 198 aa24.57■■□□□ 1.52
CHRNA3-207ENST00000559941 PI4K2BQ8TCG2 481 aa24.57■■□□□ 1.52
CHRNA3-207ENST00000559941 U2AF1L4Q8WU68 220 aaKnown RBP24.57■■□□□ 1.52
CHRNA3-207ENST00000559941 RPAP3Q9H6T3 665 aaPredicted RBP24.57■■□□□ 1.52
CHRNA3-207ENST00000559941 CNMDO75829 334 aa24.56■■□□□ 1.52
CHRNA3-207ENST00000559941 SGPL1O95470 568 aa24.56■■□□□ 1.52
CHRNA3-207ENST00000559941 OTUD7AQ8TE49 926 aaPredicted RBP24.56■■□□□ 1.52
CHRNA3-207ENST00000559941 NUDT12Q9BQG2 462 aa24.56■■□□□ 1.52
CHRNA3-207ENST00000559941 PORCNQ9H237 461 aa24.56■■□□□ 1.52
CHRNA3-207ENST00000559941 ARPP21Q9UBL0 812 aaPredicted RBP24.56■■□□□ 1.52
CHRNA3-207ENST00000559941 RLFQ13129 1914 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 GSG1L2A8MUP6 293 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 GLRX3O76003 335 aaKnown RBP24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 HMGCRP04035 888 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 CAPN2P17655 700 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 LRRFIP1Q32MZ4 808 aaKnown RBP24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 SBK1Q52WX2 424 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 GIMAP6Q6P9H5 292 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 CCAR1Q8IX12 1150 aaKnown RBP24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 SOCS4Q8WXH5 440 aa24.55■■□□□ 1.52
CHRNA3-207ENST00000559941 CYP2B6P20813 491 aa24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 GPR142Q7Z601 462 aa24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 UBE2Q1Q7Z7E8 422 aa24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 ARHGEF10LQ9HCE6 1279 aa24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 PAK6Q9NQU5 681 aaPredicted RBP24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 TMX2Q9Y320 296 aa24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 CEP290O15078 2479 aa24.54■■□□□ 1.52
CHRNA3-207ENST00000559941 SPDYE16A6NNV3 312 aaPredicted RBP24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 XRCC5P13010 732 aaKnown RBP24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 MX1P20591 662 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 CCNA1P78396 465 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 ICA1Q05084 483 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 HDAC1Q13547 482 aaPredicted RBP24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 PLEKHH3Q7Z736 793 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 USP6NLQ92738 828 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 SH2D4AQ9H788 454 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 SALL3Q9BXA9 1300 aa24.53■■□□□ 1.52
CHRNA3-207ENST00000559941 GPAA1O43292 621 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 GNAT2P19087 354 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 COG2Q14746 738 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 KIAA1755Q5JYT7 1200 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms