RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 AKR1B1P15121 316 aa16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 PDE4BQ07343 736 aa16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
CHRNB4-204ENST00000559849 USP14P54578 494 aa16.27■□□□□ 0.2
CHRNB4-204ENST00000559849 SP3Q02447 781 aa16.27■□□□□ 0.2
CHRNB4-204ENST00000559849 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
CHRNB4-204ENST00000559849 FEZ1Q99689 392 aa16.27■□□□□ 0.2
CHRNB4-204ENST00000559849 KIAA1683Q9H0B3 1180 aa16.27■□□□□ 0.2
CHRNB4-204ENST00000559849 PPP4R2Q9NY27 417 aa16.27■□□□□ 0.2
CHRNB4-204ENST00000559849 RASA1P20936 1047 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 ZMYM6O95789 1325 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 CYP2C8P10632 490 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 CHMLP26374 656 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 DGKZQ13574 1117 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 LOC285556D6RIA3 1793 aa16.26■□□□□ 0.19
CHRNB4-204ENST00000559849 C17orf99Q6UX52 265 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 PRDM1O75626 825 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 OSBPP22059 807 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 ICA1Q05084 483 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 TNS4Q8IZW8 715 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
CHRNB4-204ENST00000559849 CTDSPL2Q05D32 466 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 ZYXQ15942 572 aaKnown RBP16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 BMP2KLQ5H9B9 411 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 SIAH1Q8IUQ4 282 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 SMCR8Q8TEV9 937 aaPredicted RBP16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 RAD50Q92878 1312 aa16.24■□□□□ 0.19
CHRNB4-204ENST00000559849 A0A1W2PRG0 241 aa16.23■□□□□ 0.19
CHRNB4-204ENST00000559849 CTU1Q7Z7A3 348 aaKnown RBP16.23■□□□□ 0.19
CHRNB4-204ENST00000559849 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHRNB4-204ENST00000559849 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
CHRNB4-204ENST00000559849 CPA4Q9UI42 421 aa16.23■□□□□ 0.19
CHRNB4-204ENST00000559849 ADGRA2Q96PE1 1338 aa16.23■□□□□ 0.19
CHRNB4-204ENST00000559849 FGRP09769 529 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 ARHGEF6Q15052 776 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 IL25Q9H293 177 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 ZNF213O14771 459 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 ATP2B2Q01814 1243 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 PKN2Q16513 984 aaKnown RBP16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 CLEC10AQ8IUN9 316 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 CD99L2Q8TCZ2 262 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 BCRP11274 1271 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 VCAM1P19320 739 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 GCLCP48506 637 aaPredicted RBP16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 LACTBP83111 547 aaPredicted RBP16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 TFAP4Q01664 338 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 KIF22Q14807 665 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 NEDD1Q8NHV4 660 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 NYAP2Q9P242 653 aa16.21■□□□□ 0.19
CHRNB4-204ENST00000559849 GREB1LQ9C091 1923 aaPredicted RBP16.21■□□□□ 0.18
CHRNB4-204ENST00000559849 SGSM2O43147 1006 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 ORC4O43929 436 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 PCP11498 1178 aaKnown RBP16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 HAND2P61296 217 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 LPAR1Q92633 364 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 P2RX7Q99572 595 aaKnown RBP16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 MCOLN1Q9GZU1 580 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 VCPKMTQ9H867 229 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 RANBP6O60518 1105 aaKnown RBP16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 CEP95Q96GE4 821 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
CHRNB4-204ENST00000559849 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms