RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 DNAJB8Q8NHS0 232 aa7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 PPP1R13LQ8WUF5 828 aa7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 ASB11Q8WXH4 323 aa7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 LRRC3Q9BY71 257 aa7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 PRDM7Q9NQW5 492 aa7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 REV1Q9UBZ9 1251 aa7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-207ENST00000559738 BIN1O00499 593 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 ZNF865P0CJ78 1059 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 ZNF76P36508 570 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 SFRP5Q5T4F7 317 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 C22orf34Q6ZV56 151 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 FAM13CQ8NE31 585 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 BRMS1Q9HCU9 246 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 UBP1Q9NZI7 540 aa7.12□□□□□ -1.27
CTDSPL2-207ENST00000559738 ROBO2Q9HCK4 1378 aa7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 PITPNM2Q9BZ72 1349 aa7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 CHURC1-FNTBB4DL54 471 aa7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 VAMP1P23763 118 aa7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 CLCN7P51798 805 aa7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 ATG4DQ86TL0 474 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 CAPN6Q9Y6Q1 641 aa7.11□□□□□ -1.27
CTDSPL2-207ENST00000559738 UNCXA6NJT0 531 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 CBX7O95931 251 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 ZP2Q05996 745 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 CWF19L2Q2TBE0 894 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 ZNF394Q53GI3 561 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 ZNF746Q6NUN9 644 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 SLC23A3Q6PIS1 610 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 SLFN12Q8IYM2 578 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 MFSD4AQ8N468 514 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 CYB5D2Q8WUJ1 264 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 METTL5Q9NRN9 209 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 KLHL3Q9UH77 587 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 CEP131Q9UPN4 1083 aa7.1□□□□□ -1.27
CTDSPL2-207ENST00000559738 YBX3P16989 372 aaKnown RBP eCLIP7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 YARSP54577 528 aaKnown RBP7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 CDKAL1Q5VV42 579 aa7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 HSPA12BQ96MM6 686 aa7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 SEMA3GQ9NS98 782 aa7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 KIAA1522Q9P206 1035 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 PCDHB14Q9Y5E9 798 aa7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 PCDHGB7Q9Y5F8 929 aa7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
CTDSPL2-207ENST00000559738 CARMIL2Q6F5E8 1435 aa7.09□□□□□ -1.28
CTDSPL2-207ENST00000559738 TNK2Q07912 1038 aa7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 SEZ6Q53EL9 994 aa7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 FAM168AQ92567 244 aa7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 MRRFQ96E11 262 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 Q96M66 194 aa7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 NT5C1AQ9BXI3 368 aa7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
CTDSPL2-207ENST00000559738 SLC22A31A6NKX4 558 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 H3BS24 57 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 ATE1O95260 518 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 CYP7A1P22680 504 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 RACK1P63244 317 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 CLCQ05315 142 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 APOBRQ0VD83 1088 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 BAHD1Q8TBE0 780 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 RNF34Q969K3 372 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 SPON2Q9BUD6 331 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 EHMT1Q9H9B1 1298 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 ATP13A1Q9HD20 1204 aa7.07□□□□□ -1.28
CTDSPL2-207ENST00000559738 SCAMP3O14828 347 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 ETV3P41162 512 aa7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 KIR3DL1P43629 444 aa7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 METTL16Q86W50 562 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 SLITRK4Q8IW52 837 aa7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 POU5F2Q8N7G0 328 aa7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 COX4I2Q96KJ9 171 aa7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 CARS2Q9HA77 564 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-207ENST00000559738 LRRN2O75325 713 aa7.05□□□□□ -1.28
CTDSPL2-207ENST00000559738 ARSHQ5FYA8 562 aa7.05□□□□□ -1.28
CTDSPL2-207ENST00000559738 GK5Q6ZS86 529 aa7.05□□□□□ -1.28
CTDSPL2-207ENST00000559738 FLAD1Q8NFF5 587 aa7.05□□□□□ -1.28
CTDSPL2-207ENST00000559738 NKD1Q969G9 470 aa7.05□□□□□ -1.28
CTDSPL2-207ENST00000559738 KIF2CQ99661 725 aa7.05□□□□□ -1.28
CTDSPL2-207ENST00000559738 WASH4PA8MWX3 477 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 MCM4P33991 863 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 REXO1Q8N1G1 1221 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 CCDC74BQ96LY2 380 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 ANTXR1Q9H6X2 564 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 GMIPQ9P107 970 aa7.04□□□□□ -1.28
CTDSPL2-207ENST00000559738 RGS13O14921 159 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 UBOX5O94941 541 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 C8AP07357 584 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 HDLBPQ00341 1268 aaKnown RBP7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 THAP5Q7Z6K1 395 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 DTWD2Q8NBA8 298 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 PIWIL2Q8TC59 973 aaKnown RBP7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 RNF141Q8WVD5 230 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 UBE2FQ969M7 185 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms