RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NDUFB9Q9Y6M9 179 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 MYO9BQ13459 2157 aa15.95■□□□□ 0.14
TPM1-220ENST00000559556 USP5P45974 858 aa15.95■□□□□ 0.14
TPM1-220ENST00000559556 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
TPM1-220ENST00000559556 PDE3AQ14432 1141 aa15.95■□□□□ 0.14
TPM1-220ENST00000559556 PAGR1Q9BTK6 254 aa15.95■□□□□ 0.14
TPM1-220ENST00000559556 ANTXR1Q9H6X2 564 aa15.95■□□□□ 0.14
TPM1-220ENST00000559556 PRUNE2Q8WUY3 3088 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 Q3C1V9 767 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 MORN1Q5T089 497 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 GPR142Q7Z601 462 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 APBA2Q99767 749 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 RIOK1Q9BRS2 568 aaKnown RBP15.94■□□□□ 0.14
TPM1-220ENST00000559556 KIAA1683Q9H0B3 1180 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 EXOC6BQ9Y2D4 811 aa15.94■□□□□ 0.14
TPM1-220ENST00000559556 USP17L15C9J2P7 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L13C9JLJ4 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L11C9JVI0 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L18D6R9N7 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L22D6RA61 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L17D6RBQ6 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L19D6RCP7 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L20D6RJB6 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
TPM1-220ENST00000559556 RGS2P41220 211 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP14P54578 494 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 CACNB2Q08289 660 aaPredicted RBP15.93■□□□□ 0.14
TPM1-220ENST00000559556 USP17L24Q0WX57 530 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 LBX2Q6XYB7 198 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 PLEKHH3Q7Z736 793 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 TTC6Q86TZ1 520 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 AACSQ86V21 672 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 C7orf61Q8IZ16 206 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 FEZ1Q99689 392 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 GDF15Q99988 308 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 C11orf49Q9H6J7 331 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 PFASO15067 1338 aa15.93■□□□□ 0.14
TPM1-220ENST00000559556 CNMDO75829 334 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 VCAM1P19320 739 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 BMP8BP34820 402 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 SHMT1P34896 483 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 ZYXQ15942 572 aaKnown RBP15.92■□□□□ 0.14
TPM1-220ENST00000559556 ABCB5Q2M3G0 1257 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
TPM1-220ENST00000559556 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
TPM1-220ENST00000559556 STAP2Q9UGK3 403 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 CDH23Q9H251 3354 aa15.92■□□□□ 0.14
TPM1-220ENST00000559556 SOX1O00570 391 aaPredicted RBP15.91■□□□□ 0.14
TPM1-220ENST00000559556 COL6A1P12109 1028 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 PLCD1P51178 756 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 CCNA1P78396 465 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 MAP2K5Q13163 448 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 RAB3GAP1Q15042 981 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 TTF1Q15361 905 aaPredicted RBP15.91■□□□□ 0.14
TPM1-220ENST00000559556 CCL14Q16627 93 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 CATSPERGQ6ZRH7 1159 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 ZBED9Q6R2W3 1325 aa15.91■□□□□ 0.14
TPM1-220ENST00000559556 CCND3P30281 292 aaPredicted RBP15.9■□□□□ 0.14
TPM1-220ENST00000559556 GABPAQ06546 454 aa15.9■□□□□ 0.14
TPM1-220ENST00000559556 LHX8Q68G74 356 aa15.9■□□□□ 0.14
TPM1-220ENST00000559556 RHPN1Q8TCX5 695 aa15.9■□□□□ 0.14
TPM1-220ENST00000559556 ACER1Q8TDN7 264 aa15.9■□□□□ 0.14
TPM1-220ENST00000559556 PANK1Q8TE04 598 aa15.9■□□□□ 0.14
TPM1-220ENST00000559556 MAGEB6P1A0A0J9YX57 407 aa15.89■□□□□ 0.13
TPM1-220ENST00000559556 GLRX3O76003 335 aaKnown RBP15.89■□□□□ 0.13
TPM1-220ENST00000559556 PDE6AP16499 860 aa15.89■□□□□ 0.13
TPM1-220ENST00000559556 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
TPM1-220ENST00000559556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.89■□□□□ 0.13
TPM1-220ENST00000559556 LRCH3Q96II8 777 aa15.89■□□□□ 0.13
TPM1-220ENST00000559556 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
TPM1-220ENST00000559556 CWC22Q9HCG8 908 aaKnown RBP15.89■□□□□ 0.13
TPM1-220ENST00000559556 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
TPM1-220ENST00000559556 CABP5Q9NP86 173 aa15.89■□□□□ 0.13
TPM1-220ENST00000559556 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
TPM1-220ENST00000559556 TCRBV5S4A2TA0A5A2 114 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 SLC15A5A6NIM6 579 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 SPDYE16A6NNV3 312 aaPredicted RBP15.88■□□□□ 0.13
TPM1-220ENST00000559556 HOXC6P09630 235 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 PTPREP23469 700 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 GRB14Q14449 540 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 SLC9C2Q5TAH2 1124 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 RPAP3Q9H6T3 665 aaPredicted RBP15.88■□□□□ 0.13
TPM1-220ENST00000559556 BTBD7Q9P203 1132 aa15.88■□□□□ 0.13
TPM1-220ENST00000559556 POLR3DP05423 398 aaPredicted RBP15.87■□□□□ 0.13
TPM1-220ENST00000559556 SYN1P17600 705 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 EVX2Q03828 476 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 SEPT2Q15019 361 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 GPR153Q6NV75 609 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 CLASRPQ8N2M8 674 aaKnown RBP15.87■□□□□ 0.13
TPM1-220ENST00000559556 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 EDC3Q96F86 508 aaKnown RBP15.87■□□□□ 0.13
TPM1-220ENST00000559556 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 ZNF532Q9HCE3 1301 aa15.87■□□□□ 0.13
TPM1-220ENST00000559556 MS4A1P11836 297 aa15.86■□□□□ 0.13
TPM1-220ENST00000559556 MAGEA10P43363 369 aaPredicted RBP15.86■□□□□ 0.13
TPM1-220ENST00000559556 MFSD14CQ5VZR4 134 aa15.86■□□□□ 0.13
TPM1-220ENST00000559556 MIER1Q8N108 512 aa15.86■□□□□ 0.13
TPM1-220ENST00000559556 SDR42E1Q8WUS8 393 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms