RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 GABPAQ06546 454 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 USP17L24Q0WX57 530 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 LCORLQ8N3X6 602 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 TRIB2Q92519 343 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 EDC3Q96F86 508 aaKnown RBP18.07■□□□□ 0.48
LRRC28-213ENST00000559399 ATAD5Q96QE3 1844 aa18.07■□□□□ 0.48
LRRC28-213ENST00000559399 RPTORQ8N122 1335 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 XRCC5P13010 732 aaKnown RBP18.06■□□□□ 0.48
LRRC28-213ENST00000559399 ATP5JP18859 108 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 CYP2B6P20813 491 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.06■□□□□ 0.48
LRRC28-213ENST00000559399 PORCNQ9H237 461 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 HMX1Q9NP08 348 aaPredicted RBP18.06■□□□□ 0.48
LRRC28-213ENST00000559399 DCP1AQ9NPI6 582 aaPredicted RBP18.06■□□□□ 0.48
LRRC28-213ENST00000559399 NR2E3Q9Y5X4 410 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 FOCADQ5VW36 1801 aa18.06■□□□□ 0.48
LRRC28-213ENST00000559399 ADD2P35612 726 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
LRRC28-213ENST00000559399 TRIM32Q13049 653 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 Q3C1V9 767 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 C20orf194Q5TEA3 1177 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 POTEEQ6S8J3 1075 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 GPR142Q7Z601 462 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 HAUS7Q99871 368 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
LRRC28-213ENST00000559399 RABGAP1Q9Y3P9 1069 aa18.05■□□□□ 0.48
LRRC28-213ENST00000559399 MGAMO43451 1857 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
LRRC28-213ENST00000559399 MBD4O95243 580 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 ZKSCAN1P17029 563 aaPredicted RBP18.04■□□□□ 0.48
LRRC28-213ENST00000559399 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 RGS2P41220 211 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 CCNA1P78396 465 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 EVX2Q03828 476 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 SEPT2Q15019 361 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 MAP3K21Q5TCX8 1036 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 CATSPERGQ6ZRH7 1159 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 PLEKHH3Q7Z736 793 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 TRMT44Q8IYL2 757 aaKnown RBP18.04■□□□□ 0.48
LRRC28-213ENST00000559399 ANKLE1Q8NAG6 615 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 LRRCC1Q9C099 1032 aa18.04■□□□□ 0.48
LRRC28-213ENST00000559399 CYP2D6P10635 497 aa18.03■□□□□ 0.48
LRRC28-213ENST00000559399 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
LRRC28-213ENST00000559399 MORN1Q5T089 497 aa18.03■□□□□ 0.48
LRRC28-213ENST00000559399 NECAB2Q7Z6G3 386 aa18.03■□□□□ 0.48
LRRC28-213ENST00000559399 PAWRQ96IZ0 340 aaKnown RBP18.03■□□□□ 0.48
LRRC28-213ENST00000559399 APBA2Q99767 749 aa18.03■□□□□ 0.48
LRRC28-213ENST00000559399 RPAP3Q9H6T3 665 aaPredicted RBP18.03■□□□□ 0.48
LRRC28-213ENST00000559399 ATP8A2Q9NTI2 1148 aa18.03■□□□□ 0.48
LRRC28-213ENST00000559399 SWAP70Q9UH65 585 aa18.03■□□□□ 0.48
LRRC28-213ENST00000559399 EVI5O60447 810 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 CNMDO75829 334 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 UBE3CQ15386 1083 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 SLFNL1Q499Z3 407 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 DDX60LQ5H9U9 1706 aaKnown RBP18.02■□□□□ 0.48
LRRC28-213ENST00000559399 LBX2Q6XYB7 198 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 TMEM179Q6ZVK1 233 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 SLC44A5Q8NCS7 719 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 DIS3LQ8TF46 1054 aaKnown RBP18.02■□□□□ 0.48
LRRC28-213ENST00000559399 USP6NLQ92738 828 aa18.02■□□□□ 0.48
LRRC28-213ENST00000559399 CDK5RAP2Q96SN8 1893 aa18.01■□□□□ 0.47
LRRC28-213ENST00000559399 PRKAB2O43741 272 aa18.01■□□□□ 0.47
LRRC28-213ENST00000559399 GLRX3O76003 335 aaKnown RBP18.01■□□□□ 0.47
LRRC28-213ENST00000559399 AMOTL1Q8IY63 956 aa18.01■□□□□ 0.47
LRRC28-213ENST00000559399 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
LRRC28-213ENST00000559399 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
LRRC28-213ENST00000559399 MYO5AQ9Y4I1 1855 aaKnown RBP18.01■□□□□ 0.47
LRRC28-213ENST00000559399 A0A1W2PRG0 241 aa18■□□□□ 0.47
LRRC28-213ENST00000559399 SPDYE16A6NNV3 312 aaPredicted RBP18■□□□□ 0.47
LRRC28-213ENST00000559399 WDR78Q5VTH9 848 aa18■□□□□ 0.47
LRRC28-213ENST00000559399 ZSCAN25Q6NSZ9 544 aa18■□□□□ 0.47
LRRC28-213ENST00000559399 NBPF3Q9H094 633 aa18■□□□□ 0.47
LRRC28-213ENST00000559399 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
LRRC28-213ENST00000559399 OGDHLQ9ULD0 1010 aa18■□□□□ 0.47
LRRC28-213ENST00000559399 SMARCA5O60264 1052 aaPredicted RBP17.99■□□□□ 0.47
LRRC28-213ENST00000559399 MAP2K5Q13163 448 aa17.99■□□□□ 0.47
LRRC28-213ENST00000559399 CCL14Q16627 93 aa17.99■□□□□ 0.47
LRRC28-213ENST00000559399 ECHDC1Q9NTX5 307 aa17.99■□□□□ 0.47
LRRC28-213ENST00000559399 BTBD7Q9P203 1132 aa17.99■□□□□ 0.47
LRRC28-213ENST00000559399 IVNS1ABPQ9Y6Y0 642 aa17.99■□□□□ 0.47
LRRC28-213ENST00000559399 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 CHGBP05060 677 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 PTPREP23469 700 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 ICA1Q05084 483 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-213ENST00000559399 C12orf60Q5U649 245 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 LPAR1Q92633 364 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 CCDC17Q96LX7 622 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 TANGO6Q9C0B7 1094 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 SH2D4AQ9H788 454 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 ARHGEF10LQ9HCE6 1279 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 SLC4A4Q9Y6R1 1079 aa17.98■□□□□ 0.47
LRRC28-213ENST00000559399 CYP2D7A0A087X1C5 515 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 USP17L12C9JPN9 530 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 USP17L21D6R901 530 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms