RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GDF2Q9UK05 429 aaPredicted RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 G3BP2Q9UN86 482 aaKnown RBP3.17□□□□□ -1.9
GABPB1-209ENST00000559100 AP4E1Q9UPM8 1137 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 PLAAQ9Y263 795 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 PRR36Q9H6K5 1346 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 LTBP3Q9NS15 1303 aa3.17□□□□□ -1.9
GABPB1-209ENST00000559100 UPK3BL1B0FP48 263 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 CHURC1-FNTBB4DL54 471 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 UPK3BL2E5RIL1 263 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 IRS4O14654 1257 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 DDX3YO15523 660 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 DNAJA2O60884 412 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 RNGTTO60942 597 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 AOC2O75106 756 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 CTSBP07858 339 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 EPXP11678 715 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 L1CAMP32004 1257 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 CD68P34810 354 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 ID3Q02535 119 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 GAS6Q14393 721 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 SLC10A6Q3KNW5 377 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 TMEM67Q5HYA8 995 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 TDRD10Q5VZ19 366 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 MSL1Q68DK7 614 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 INTS3Q68E01 1043 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 HEATR6Q6AI08 1181 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 SLCO4C1Q6ZQN7 724 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 CYFIP1Q7L576 1253 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 ADAT2Q7Z6V5 191 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 FERMT3Q86UX7 667 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 DMRTC2Q8IXT2 367 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 NIM1KQ8IY84 436 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 ZBTB38Q8NAP3 1195 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 CHAC2Q8WUX2 184 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 ZNF669Q96BR6 464 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 SLC6A18Q96N87 628 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 KIF2CQ99661 725 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 DPH2Q9BQC3 489 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 WNT10AQ9GZT5 417 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 MKRN2Q9H000 416 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 EPN3Q9H201 632 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 CNNM2Q9H8M5 875 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 DDX56Q9NY93 547 aaKnown RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 ADAM30Q9UKF2 790 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 ZNF214Q9UL59 606 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-209ENST00000559100 MKL2Q9ULH7 1088 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 HIF3AQ9Y2N7 669 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 STARD13Q9Y3M8 1113 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 TACC3Q9Y6A5 838 aa3.16□□□□□ -1.9
GABPB1-209ENST00000559100 TRAV20A0A0B4J274 112 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 LOC100289279A0A1B0GTE1 492 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CLEC3AO75596 197 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 SELPP16109 830 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 IRAK1P51617 712 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 AMPD3Q01432 767 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 HSP90AA2PQ14568 343 aaPredicted RBP3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CBX2Q14781 532 aaPredicted RBP3.15□□□□□ -1.91
GABPB1-209ENST00000559100 GRIK5Q16478 980 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 DUOXA2Q1HG44 320 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 KIF4BQ2VIQ3 1234 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 HSP90AB2PQ58FF8 381 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 DALRD3Q5D0E6 543 aaKnown RBP3.15□□□□□ -1.91
GABPB1-209ENST00000559100 ZC3H12AQ5D1E8 599 aaKnown RBP3.15□□□□□ -1.91
GABPB1-209ENST00000559100 ZC3H12BQ5HYM0 836 aaKnown RBP3.15□□□□□ -1.91
GABPB1-209ENST00000559100 TMEM201Q5SNT2 666 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 ZBTB37Q5TC79 503 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CDCP2Q5VXM1 449 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 NUTM2GQ5VZR2 741 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 WWC2Q6AWC2 1192 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CHSY3Q70JA7 882 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 HID1Q8IV36 788 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 MAP4K3Q8IVH8 894 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CCDC144CPQ8IYA2 1237 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 LRRN4CLQ8ND94 238 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 ZNF507Q8TCN5 953 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 DCAF11Q8TEB1 546 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 XAGE3Q8WTP9 111 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 JDP2Q8WYK2 163 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 ACSF2Q96CM8 615 aaPredicted RBP3.15□□□□□ -1.91
GABPB1-209ENST00000559100 MFSD3Q96ES6 412 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CCDC136Q96JN2 1154 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 TMEM87BQ96K49 555 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 APBA2Q99767 749 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 WDR18Q9BV38 432 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 PIDD1Q9HB75 910 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 HOMER2Q9NSB8 354 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 CACNA2D2Q9NY47 1150 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 SUGT1Q9Y2Z0 365 aa3.15□□□□□ -1.91
GABPB1-209ENST00000559100 ANKRD34BA5PLL1 514 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 SPDYE3A6NKU9 549 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 TNFRSF10CO14798 259 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 FANCGO15287 622 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 RAPGEF3O95398 923 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 PARNO95453 639 aaKnown RBP3.14□□□□□ -1.91
GABPB1-209ENST00000559100 APPP05067 770 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 EPHX1P07099 455 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 PDGFRBP09619 1106 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 SOX5P35711 763 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 CCNFP41002 786 aa3.14□□□□□ -1.91
GABPB1-209ENST00000559100 GATA4P43694 442 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms