RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 CDX2Q99626 313 aaPredicted RBP13.7□□□□□ -0.22
CHRNA3-205ENST00000559080 PAGR1Q9BTK6 254 aa13.7□□□□□ -0.22
CHRNA3-205ENST00000559080 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
CHRNA3-205ENST00000559080 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
CHRNA3-205ENST00000559080 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
CHRNA3-205ENST00000559080 GDF11O95390 407 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 IGHA2P01877 340 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 MCAMP43121 646 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 ERC1Q8IUD2 1116 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 EDC3Q96F86 508 aaKnown RBP13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 LBHD1Q9BQE6 289 aaPredicted RBP13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 ZBTB21Q9ULJ3 1066 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
CHRNA3-205ENST00000559080 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 A0A0G2JMZ2 1700 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 SHHQ15465 462 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 C9orf50Q5SZB4 431 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 ADGRA1Q86SQ6 560 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 FOXP4Q8IVH2 680 aaPredicted RBP13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 GTF3C2Q8WUA4 911 aaPredicted RBP13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 LPAR1Q92633 364 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 SEMA6BQ9H3T3 888 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 GINM1Q9NU53 330 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 AATFQ9NY61 560 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 LRP2BPQ9P2M1 347 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 EXOC6BQ9Y2D4 811 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 MYH8P13535 1937 aa13.68□□□□□ -0.22
CHRNA3-205ENST00000559080 FLT1P17948 1338 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 COL11A1P12107 1806 aaPredicted RBP13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 DNM1LO00429 736 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 HMMRO75330 724 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 HOXC6P09630 235 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 PTPREP23469 700 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 RTP1P59025 263 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 PPP4CP60510 307 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 TRPV1Q8NER1 839 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 MAFAQ8NHW3 353 aaPredicted RBP13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 NPLOC4Q8TAT6 608 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 C12orf42Q96LP6 360 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 NOL10Q9BSC4 688 aaKnown RBP13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 TTYH1Q9H313 450 aaPredicted RBP13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 PRDM6Q9NQX0 595 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 PALD1Q9ULE6 856 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 RABGAP1Q9Y3P9 1069 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
CHRNA3-205ENST00000559080 MSCO60682 206 aa13.66□□□□□ -0.22
CHRNA3-205ENST00000559080 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
CHRNA3-205ENST00000559080 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
CHRNA3-205ENST00000559080 CCDC8Q9H0W5 538 aaPredicted RBP13.66□□□□□ -0.22
CHRNA3-205ENST00000559080 SNRKQ9NRH2 765 aa13.66□□□□□ -0.22
CHRNA3-205ENST00000559080 DBNLQ9UJU6 430 aaKnown RBP13.66□□□□□ -0.22
CHRNA3-205ENST00000559080 SLC15A5A6NIM6 579 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 CYBAP13498 195 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 CYP2C19P33261 490 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 GRB14Q14449 540 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 NAA16Q6N069 864 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 SLC39A5Q6ZMH5 540 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 CRACR2BQ8N4Y2 399 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 MYLIPQ8WY64 445 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 ZNF512BQ96KM6 892 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 BTBD7Q9P203 1132 aa13.65□□□□□ -0.22
CHRNA3-205ENST00000559080 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 BAG3O95817 575 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 PLCG2P16885 1265 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 CNGA1P29973 690 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 SNX17Q15036 470 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 GJC2Q5T442 439 aaPredicted RBP13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 TATDN1Q6P1N9 297 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 AACSQ86V21 672 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
CHRNA3-205ENST00000559080 NAV1Q8NEY1 1877 aa13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 IGSF3O75054 1194 aa13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 GH2P01242 217 aa13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 CYP2E1P05181 493 aaPredicted RBP13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 CCNA1P78396 465 aa13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
CHRNA3-205ENST00000559080 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms