RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.05
CPNE6-210ENST00000558995 DOCK2Q92608 1830 aa15.33■□□□□ 0.05
CPNE6-210ENST00000558995 RGL2O15211 777 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 CYP7A1P22680 504 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 UBE4AQ14139 1066 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 NAA30Q147X3 362 aaPredicted RBP15.33■□□□□ 0.04
CPNE6-210ENST00000558995 PPP2R5BQ15173 497 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 ZNF654Q8IZM8 581 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 ZNF215Q9UL58 517 aaPredicted RBP15.33■□□□□ 0.04
CPNE6-210ENST00000558995 DPF2Q92785 391 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 ERO1AQ96HE7 468 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 FAM84BQ96KN1 310 aaPredicted RBP15.33■□□□□ 0.04
CPNE6-210ENST00000558995 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
CPNE6-210ENST00000558995 ANAPC4Q9UJX5 808 aa15.33■□□□□ 0.04
CPNE6-210ENST00000558995 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 CCP110O43303 1012 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
CPNE6-210ENST00000558995 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 CCDC82Q8N4S0 544 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 NUP133Q8WUM0 1156 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 FANCLQ9NW38 375 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 CEP131Q9UPN4 1083 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.32■□□□□ 0.04
CPNE6-210ENST00000558995 BMP6P22004 513 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 TM4SF1P30408 202 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 NFIXQ14938 502 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 POSTNQ15063 836 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 SPECC1Q5M775 1068 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 NT5DC1Q5TFE4 455 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 VSTM4Q8IW00 320 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 ESR2Q92731 530 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 TFCP2L1Q9NZI6 479 aa15.32■□□□□ 0.04
CPNE6-210ENST00000558995 SRPRBQ9Y5M8 271 aaKnown RBP15.32■□□□□ 0.04
CPNE6-210ENST00000558995 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
CPNE6-210ENST00000558995 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 CASZ1Q86V15 1759 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 SBF2Q86WG5 1849 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 MAGEB6P1A0A0J9YX57 407 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 FOXN1O15353 648 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 LY75O60449 1722 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 CAPN2P17655 700 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 GRIN1Q05586 938 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 PDE4BQ07343 736 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 NR5A1Q13285 461 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 SEC23AQ15436 765 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 CAVIN4Q5BKX8 364 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 CMTR1Q8N1G2 835 aaKnown RBP15.31■□□□□ 0.04
CPNE6-210ENST00000558995 MLKLQ8NB16 471 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 RNF26Q9BY78 433 aaPredicted RBP15.31■□□□□ 0.04
CPNE6-210ENST00000558995 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 GNL3LQ9NVN8 582 aaKnown RBP15.31■□□□□ 0.04
CPNE6-210ENST00000558995 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 TAF1LQ8IZX4 1826 aa15.31■□□□□ 0.04
CPNE6-210ENST00000558995 ECM29Q5VYK3 1845 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 MINDY4BA8MYZ0 360 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 POLR2DO15514 142 aaKnown RBP15.3■□□□□ 0.04
CPNE6-210ENST00000558995 SARSP49591 514 aaKnown RBP15.3■□□□□ 0.04
CPNE6-210ENST00000558995 KANK3Q6NY19 840 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 L2HGDHQ9H9P8 463 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 DACH1Q9UI36 760 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 TOP1P11387 765 aaKnown RBP15.3■□□□□ 0.04
CPNE6-210ENST00000558995 SDR42E1Q8WUS8 393 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 SERTAD1Q9UHV2 236 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 MORC2Q9Y6X9 1032 aaPredicted RBP15.3■□□□□ 0.04
CPNE6-210ENST00000558995 TNKSO95271 1327 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 COL24A1Q17RW2 1714 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 TRIM37O94972 964 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 AKAP17AQ02040 695 aaKnown RBP15.3■□□□□ 0.04
CPNE6-210ENST00000558995 TXNRD3Q86VQ6 643 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 TRIML1Q8N9V2 468 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 SMARCE1Q969G3 411 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 JAG2Q9Y219 1238 aa15.3■□□□□ 0.04
CPNE6-210ENST00000558995 XBP1P17861 261 aa15.29■□□□□ 0.04
CPNE6-210ENST00000558995 SYT10Q6XYQ8 523 aa15.29■□□□□ 0.04
CPNE6-210ENST00000558995 ZNF384Q8TF68 577 aa15.29■□□□□ 0.04
CPNE6-210ENST00000558995 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
CPNE6-210ENST00000558995 SMIM22K7EJ46 135 aa15.29■□□□□ 0.04
CPNE6-210ENST00000558995 MORC3Q14149 939 aa15.29■□□□□ 0.04
CPNE6-210ENST00000558995 ZNF397Q8NF99 534 aaPredicted RBP15.29■□□□□ 0.04
CPNE6-210ENST00000558995 ENOX1Q8TC92 643 aaKnown RBP15.29■□□□□ 0.04
CPNE6-210ENST00000558995 RIOK1Q9BRS2 568 aaKnown RBP15.29■□□□□ 0.04
CPNE6-210ENST00000558995 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 TMEM232C9JQI7 657 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 EGFL6Q8IUX8 553 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 ZSCAN10Q96SZ4 725 aaPredicted RBP15.28■□□□□ 0.04
CPNE6-210ENST00000558995 ACTN4O43707 911 aaKnown RBP15.28■□□□□ 0.04
CPNE6-210ENST00000558995 ETF1P62495 437 aaKnown RBP15.28■□□□□ 0.04
CPNE6-210ENST00000558995 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 FCHSD1Q86WN1 690 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 CNBD1Q8NA66 436 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 INTS13Q9NVM9 706 aa15.28■□□□□ 0.04
CPNE6-210ENST00000558995 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
CPNE6-210ENST00000558995 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 ZNF18P17022 549 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 CCDC93Q567U6 631 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 HOMER1Q86YM7 354 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms