RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 SAMM50Q9Y512 469 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 CADPSQ9ULU8 1353 aa4.89□□□□□ -1.63
LRRC28-212ENST00000558911 BMP6P22004 513 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 INPP5AQ14642 412 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.88□□□□□ -1.63
LRRC28-212ENST00000558911 LLGL2Q6P1M3 1020 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 C8orf37Q96NL8 207 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 NECAB3Q96P71 396 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-212ENST00000558911 CITED4Q96RK1 184 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 ZCCHC4Q9H5U6 513 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 RAPGEFL1Q9UHV5 662 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 ST14Q9Y5Y6 855 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 CAPN6Q9Y6Q1 641 aa4.88□□□□□ -1.63
LRRC28-212ENST00000558911 KDM6BO15054 1643 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 WASH4PA8MWX3 477 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 TRIM37O94972 964 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 ETF1P62495 437 aaKnown RBP4.87□□□□□ -1.63
LRRC28-212ENST00000558911 NKG7Q16617 165 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 TMEM132EQ6IEE7 984 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 CREG2Q8IUH2 290 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 DMRTB1Q96MA1 342 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 SLC26A8Q96RN1 970 aa4.87□□□□□ -1.63
LRRC28-212ENST00000558911 PNMA6FA0A0J9YX94 578 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 ENC1O14682 589 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 IGHA2P01877 340 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 MED14OSP0DP75 135 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 GLDCP23378 1020 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 RING1Q06587 406 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 RASIP1Q5U651 963 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 LETMD1Q6P1Q0 360 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 ZNF605Q86T29 641 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 CDH24Q86UP0 819 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 ADAMTS10Q9H324 1103 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 C19orf44Q9H6X5 657 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 PARD6AQ9NPB6 346 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 TMEM59LQ9UK28 342 aa4.86□□□□□ -1.63
LRRC28-212ENST00000558911 SOWAHDA6NJG2 315 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 ZC3H6P61129 1189 aaKnown RBP4.85□□□□□ -1.63
LRRC28-212ENST00000558911 TNK2Q07912 1038 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 SLBPQ14493 270 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRRC28-212ENST00000558911 LRRC14Q15048 493 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 NAALADL2Q58DX5 795 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 ZNF326Q5BKZ1 582 aaKnown RBP4.85□□□□□ -1.63
LRRC28-212ENST00000558911 ANKRD13AQ8IZ07 590 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 UBXN4Q92575 508 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 PLPPR2Q96GM1 343 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 RNF32Q9H0A6 362 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 CACNA2D2Q9NY47 1150 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 JAG2Q9Y219 1238 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 CC2D2AQ9P2K1 1620 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 ADAMTS20P59510 1910 aa4.85□□□□□ -1.63
LRRC28-212ENST00000558911 ARID4BQ4LE39 1312 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 ANKRD33BA6NCL7 494 aa4.84□□□□□ -1.63
LRRC28-212ENST00000558911 FOXD2O60548 495 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 NCLP19338 710 aaKnown RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 TAGLNQ01995 201 aaKnown RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 PTPN11Q06124 597 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 PRAMEF13Q5VWM6 474 aa4.84□□□□□ -1.63
LRRC28-212ENST00000558911 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 HDXQ7Z353 690 aa4.84□□□□□ -1.63
LRRC28-212ENST00000558911 THAP5Q7Z6K1 395 aa4.84□□□□□ -1.63
LRRC28-212ENST00000558911 MFSD2AQ8NA29 543 aa4.84□□□□□ -1.63
LRRC28-212ENST00000558911 CEP44Q9C0F1 390 aa4.84□□□□□ -1.63
LRRC28-212ENST00000558911 BIN2Q9UBW5 565 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-212ENST00000558911 BAZ1AQ9NRL2 1556 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-212ENST00000558911 ANKRD62A6NC57 917 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 HPXP02790 462 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 ESR1P03372 595 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 CELA3AP09093 270 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 CYP7A1P22680 504 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 TPP2P29144 1249 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-212ENST00000558911 CDK8P49336 464 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 PRELPP51888 382 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 PCNX4Q63HM2 1172 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 TMC7Q7Z402 723 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 C3orf58Q8NDZ4 430 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 ALKBH8Q96BT7 664 aaKnown RBP4.83□□□□□ -1.64
LRRC28-212ENST00000558911 DPH2Q9BQC3 489 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-212ENST00000558911 SGPP1Q9BX95 441 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 MCOLN1Q9GZU1 580 aa4.83□□□□□ -1.64
LRRC28-212ENST00000558911 CNOT6Q9ULM6 557 aaKnown RBP4.83□□□□□ -1.64
LRRC28-212ENST00000558911 ERCC6Q03468 1493 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 A0A0G2JLL6 359 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-212ENST00000558911 VAMP1P23763 118 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 GSTT1P30711 240 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 GRK4P32298 578 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 PDE6BP35913 854 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 GALK1P51570 392 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 WIPI1Q5MNZ9 446 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-212ENST00000558911 ZNF746Q6NUN9 644 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-212ENST00000558911 GIMAP6Q6P9H5 292 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 C22orf34Q6ZV56 151 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 HID1Q8IV36 788 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 RBCK1Q9BYM8 510 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 WNT10AQ9GZT5 417 aa4.82□□□□□ -1.64
LRRC28-212ENST00000558911 SETD1AO15047 1707 aaKnown RBP4.82□□□□□ -1.64
LRRC28-212ENST00000558911 DLG4P78352 724 aa4.81□□□□□ -1.64
LRRC28-212ENST00000558911 PLCB3Q01970 1234 aa4.81□□□□□ -1.64
LRRC28-212ENST00000558911 TMPRSS7Q7RTY8 843 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms