RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 OXER1Q8TDS5 423 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 ARHGAP39Q9C0H5 1083 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 HERC5Q9UII4 1024 aaKnown RBP14.48□□□□□ -0.09
TPM1-216ENST00000558910 SLC4A4Q9Y6R1 1079 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 USP17L5A8MUK1 530 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 SMIM22K7EJ46 135 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 CXCL11O14625 94 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 GH2P01242 217 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 MOGSQ13724 837 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 RAB3GAP1Q15042 981 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 TREML2Q5T2D2 321 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 GPAT2Q6NUI2 795 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 ANKRD23Q86SG2 305 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 FOXP4Q8IVH2 680 aaPredicted RBP14.47□□□□□ -0.09
TPM1-216ENST00000558910 DYNLL2Q96FJ2 89 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 ERO1AQ96HE7 468 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 LNPKQ9C0E8 428 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 PUS7LQ9H0K6 701 aaKnown RBP14.47□□□□□ -0.09
TPM1-216ENST00000558910 EFCC1Q9HA90 598 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 HPS5Q9UPZ3 1129 aa14.47□□□□□ -0.09
TPM1-216ENST00000558910 A0A0G2JLL6 359 aaPredicted RBP14.46□□□□□ -0.09
TPM1-216ENST00000558910 IGHDP01880 384 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 MX1P20591 662 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 MTMR2Q13614 643 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 ZSCAN25Q6NSZ9 544 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 FASTKD5Q7L8L6 764 aaKnown RBP14.46□□□□□ -0.09
TPM1-216ENST00000558910 OTOP1Q7RTM1 612 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 PRRT2Q7Z6L0 340 aaPredicted RBP14.46□□□□□ -0.09
TPM1-216ENST00000558910 TTC6Q86TZ1 520 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 SPNS2Q8IVW8 549 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 SLC44A5Q8NCS7 719 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 ZNF280CQ8ND82 737 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 CFHR5Q9BXR6 569 aa14.46□□□□□ -0.09
TPM1-216ENST00000558910 DCP1AQ9NPI6 582 aaPredicted RBP14.46□□□□□ -0.09
TPM1-216ENST00000558910 TLR2O60603 784 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 KIF22Q14807 665 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 CERKLQ49MI3 558 aaPredicted RBP14.45□□□□□ -0.1
TPM1-216ENST00000558910 CERS3Q8IU89 383 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 SMCR8Q8TEV9 937 aaPredicted RBP14.45□□□□□ -0.1
TPM1-216ENST00000558910 CDK5RAP2Q96SN8 1893 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 RWDD1Q9H446 243 aaPredicted RBP14.45□□□□□ -0.1
TPM1-216ENST00000558910 AS3MTQ9HBK9 375 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 SERPINB13Q9UIV8 391 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 ZBTB21Q9ULJ3 1066 aa14.45□□□□□ -0.1
TPM1-216ENST00000558910 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
TPM1-216ENST00000558910 DOCK1Q14185 1865 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 M0R2C6 588 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 ERC2O15083 957 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 RNF113AO15541 343 aaKnown RBP14.44□□□□□ -0.1
TPM1-216ENST00000558910 FMNL1O95466 1100 aaPredicted RBP14.44□□□□□ -0.1
TPM1-216ENST00000558910 APPP05067 770 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 ABCB5Q2M3G0 1257 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 KBTBD3Q8NAB2 608 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 PI4K2BQ8TCG2 481 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 SEC62Q99442 399 aaKnown RBP14.44□□□□□ -0.1
TPM1-216ENST00000558910 PARK7Q99497 189 aaKnown RBP14.44□□□□□ -0.1
TPM1-216ENST00000558910 FEZ1Q99689 392 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 MYH1P12882 1939 aa14.44□□□□□ -0.1
TPM1-216ENST00000558910 SIPA1L1O43166 1804 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 PEX10O60683 326 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 IGSF3O75054 1194 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
TPM1-216ENST00000558910 ASNSP08243 561 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 HDAC1Q13547 482 aaPredicted RBP14.43□□□□□ -0.1
TPM1-216ENST00000558910 UBE3CQ15386 1083 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 FBXO46Q6PJ61 603 aaPredicted RBP14.43□□□□□ -0.1
TPM1-216ENST00000558910 OSBP2Q969R2 916 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 DDRGK1Q96HY6 314 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 CABP5Q9NP86 173 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 TMOD4Q9NZQ9 345 aa14.43□□□□□ -0.1
TPM1-216ENST00000558910 TTC41PQ6P2S7 1318 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 MINDY4BA8MYZ0 360 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 USP17L12C9JPN9 530 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 USP17L21D6R901 530 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 SHMT1P34896 483 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 PSMC4P43686 418 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 LACTBP83111 547 aaPredicted RBP14.42□□□□□ -0.1
TPM1-216ENST00000558910 ATP2B2Q01814 1243 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 NOM1Q5C9Z4 860 aaKnown RBP14.42□□□□□ -0.1
TPM1-216ENST00000558910 C17orf99Q6UX52 265 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 CLEC10AQ8IUN9 316 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 AMOTL1Q8IY63 956 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 ANKRD13CQ8N6S4 541 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 ACER1Q8TDN7 264 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 AGTPBP1Q9UPW5 1226 aa14.42□□□□□ -0.1
TPM1-216ENST00000558910 ZSWIM8A7E2V4 1837 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 USP17L10C9JJH3 530 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 GPAA1O43292 621 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 RAD21O60216 631 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 CTGFP29279 349 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 SEPT2Q15019 361 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 PKN2Q16513 984 aaKnown RBP14.41□□□□□ -0.1
TPM1-216ENST00000558910 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 PTPN22Q9Y2R2 807 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 PTCH2Q9Y6C5 1203 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 NAV1Q8NEY1 1877 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms