RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 PRDM1O75626 825 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 SHMT1P34896 483 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 APOBRQ0VD83 1088 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 TCP10Q12799 353 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 APOA5Q6Q788 366 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 APOBEC3FQ8IUX4 373 aaKnown RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
HMG20A-206ENST00000558845 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
HMG20A-206ENST00000558845 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 GLTPD2A6NH11 291 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 DHX16O60231 1041 aaKnown RBP13.12□□□□□ -0.31
HMG20A-206ENST00000558845 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
HMG20A-206ENST00000558845 EGFRP00533 1210 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 TSPY3P0CV98 308 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 TSPY8P0CW00 308 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 LMOD1P29536 600 aaPredicted RBP13.12□□□□□ -0.31
HMG20A-206ENST00000558845 TFAP4Q01664 338 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
HMG20A-206ENST00000558845 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 SLC44A5Q8NCS7 719 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
HMG20A-206ENST00000558845 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 HPS5Q9UPZ3 1129 aa13.12□□□□□ -0.31
HMG20A-206ENST00000558845 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 TCP10L2B9ZVM9 353 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 DDAH1O94760 285 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 CALM1P0DP23 149 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 CALM2P0DP24 149 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 CALM3P0DP25 149 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 SCRN1Q12765 414 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 TBC1D10BQ4KMP7 808 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-206ENST00000558845 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-206ENST00000558845 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 CSRNP1Q96S65 589 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
HMG20A-206ENST00000558845 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 ZBTB43O43298 467 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 EPS15P42566 896 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 RASA3Q14644 834 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
HMG20A-206ENST00000558845 SYNE3Q6ZMZ3 975 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
HMG20A-206ENST00000558845 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
HMG20A-206ENST00000558845 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
HMG20A-206ENST00000558845 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
HMG20A-206ENST00000558845 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 SCN4AP35499 1836 aa13.1□□□□□ -0.31
HMG20A-206ENST00000558845 MYH8P13535 1937 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
HMG20A-206ENST00000558845 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
HMG20A-206ENST00000558845 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
HMG20A-206ENST00000558845 TROAPQ12815 778 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
HMG20A-206ENST00000558845 NFXL1Q6ZNB6 911 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 USP50Q70EL3 339 aaPredicted RBP13.09□□□□□ -0.31
HMG20A-206ENST00000558845 ZNF654Q8IZM8 581 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 SENP2Q9HC62 589 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
HMG20A-206ENST00000558845 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 AKR1B1P15121 316 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 METAP2P50579 478 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMG20A-206ENST00000558845 CERKLQ49MI3 558 aaPredicted RBP13.08□□□□□ -0.32
HMG20A-206ENST00000558845 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
HMG20A-206ENST00000558845 TMEM39BQ9GZU3 492 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 DEFB129Q9H1M3 183 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
HMG20A-206ENST00000558845 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
HMG20A-206ENST00000558845 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.32
HMG20A-206ENST00000558845 NMT2O60551 498 aa13.07□□□□□ -0.32
HMG20A-206ENST00000558845 CDKL5O76039 1030 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms