RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	SLC44A4	Q53GD3	710 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	NME9	Q86XW9	330 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	NRBF2	Q96F24	287 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	SPZ1	Q9BXG8	430 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	CEP126	Q9P2H0	1117 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	FAM169A	Q9Y6X4	670 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	MCF2L	O15068	1137 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	KRT75	O95678	551 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	FBLN1	P23142	703 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	KCNJ6	P48051	423 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	BLVRA	P53004	296 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	TRIM60	Q495X7	471 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	LGSN	Q5TDP6	509 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	STAMBPL1	Q96FJ0	436 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	OLFM3	Q96PB7	478 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	NOX5	Q96PH1	765 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	ZCCHC17	Q9NP64	241 aa	Known RBP	10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	PARP2	Q9UGN5	583 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	SLC12A7	Q9Y666	1083 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	DYTN	A2CJ06	578 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	TRIM66	O15016	1216 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	AP5Z1	O43299	807 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	KRT15	P19012	456 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	ZNF76	P36508	570 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768		Q6ZUG5	572 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	AFAP1L2	Q8N4X5	818 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	RILP	Q96NA2	401 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	PARD6B	Q9BYG5	372 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	L2HGDH	Q9H9P8	463 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	TPCN1	Q9ULQ1	816 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	SAMM50	Q9Y512	469 aa		10.69	□□□□□ -0.7
TRPM1-208	ENST00000558768	CCDC169	A6NNP5	214 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	GOLGA8A	A7E2F4	631 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	SLC27A2	O14975	620 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	CHGB	P05060	677 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	CCDC159	P0C7I6	412 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	EEF2	P13639	858 aa	Known RBP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	PLA2G4A	P47712	749 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	PPP2R5E	Q16537	467 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	GDAP1L1	Q96MZ0	367 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	RAB17	Q9H0T7	212 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	KIAA1468	Q9P260	1216 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	ERCC5	P28715	1186 aa	Predicted RBP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	IL13	P35225	146 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	TTF1	Q15361	905 aa	Predicted RBP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	ANKRD20A4	Q4UJ75	823 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	ANKRD20A8P	Q5CZ79	823 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	ANKRD20A2	Q5SQ80	823 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	ANKRD20A1	Q5TYW2	823 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	FERMT2	Q96AC1	680 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	MRPL46	Q9H2W6	279 aa	Known RBP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768		A0A1B0GVL5	298 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	DTNB	O60941	627 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	LMNA	P02545	664 aa	Known RBP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	AFM	P43652	599 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	OCA2	Q04671	838 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	NMI	Q13287	307 aa	Predicted RBP	10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	UNC5CL	Q8IV45	518 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	IQCD	Q96DY2	449 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	ANGPTL2	Q9UKU9	493 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	PPP2R2C	Q9Y2T4	447 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	FHOD1	Q9Y613	1164 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	CA8	P35219	290 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	G2E3	Q7L622	706 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	FGD4	Q96M96	766 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	FAM210A	Q96ND0	272 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	TXLNG	Q9NUQ3	528 aa		10.68	□□□□□ -0.7
TRPM1-208	ENST00000558768	SERPINB6	P35237	376 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	SCYL3	Q8IZE3	742 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	TUBB6	Q9BUF5	446 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	STOML1	Q9UBI4	398 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	CCZ1B	P86790	482 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	CCZ1	P86791	482 aa	Predicted RBP	10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	VWA3B	Q502W6	1294 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	GJC2	Q5T442	439 aa	Predicted RBP	10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	TRIML2	Q8N7C3	387 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	BICC1	Q9H694	974 aa	Known RBP	10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	ENO4	A6NNW6	628 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	TADA3	O75528	432 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	ARHGAP4	P98171	946 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	SEMA3F	Q13275	785 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	SLC9C1	Q4G0N8	1177 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	C16orf87	Q6PH81	154 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	PLCH2	O75038	1416 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	YEATS2	Q9ULM3	1422 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	TRPM2	O94759	1503 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	TMEM232	C9JQI7	657 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	LARGE1	O95461	756 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	PPP1R2	P41236	205 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	SLC8A3	P57103	927 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	ST5	P78524	1137 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	APOBR	Q0VD83	1088 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	KRT80	Q6KB66	452 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	SRGAP1	Q7Z6B7	1085 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	PDZD8	Q8NEN9	1154 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	CCDC51	Q96ER9	411 aa		10.67	□□□□□ -0.7
TRPM1-208	ENST00000558768	MPHOSPH6	Q99547	160 aa	Known RBP	10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms