RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TEX33O43247 280 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 RTN2O75298 545 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 NDUFA10O95299 355 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 PTPREP23469 700 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 ARFGAP2Q8N6H7 521 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 RIN2Q8WYP3 895 aaPredicted RBP18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 HOOK2Q96ED9 719 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 MMS19Q96T76 1030 aa18.19■□□□□ 0.5
HMBOX1-212ENST00000558662 KLF18A0A0U1RQI7 1052 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 ERVK-24P63145 666 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 NAA35Q5VZE5 725 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 OTUD7BQ6GQQ9 843 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 PPP4R3AQ6IN85 833 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 KIAA1328Q86T90 577 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 PARP9Q8IXQ6 854 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 CCDC13Q8IYE1 715 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 WASF1Q92558 559 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 SGSM3Q96HU1 749 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 GSDMAQ96QA5 445 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 ALG1Q9BT22 464 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 TSGA10Q9BZW7 698 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 STK36Q9NRP7 1315 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 FER1L4A9Z1Z3 1794 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 HEG1Q9ULI3 1381 aa18.18■□□□□ 0.5
HMBOX1-212ENST00000558662 BCL9LQ86UU0 1499 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 ANKRD18BA2A2Z9 1011 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 FAM107AO95990 144 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 GRIK3Q13003 919 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 CUL4BQ13620 913 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 KRT40Q6A162 431 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■■ 52.8
HMBOX1-212ENST00000558662 JAKMIP2Q96AA8 810 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 SLC40A1Q9NP59 571 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 METP08581 1390 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 MYO5AQ9Y4I1 1855 aaKnown RBP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 LMTK3Q96Q04 1460 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 ANKRD33BA6NCL7 494 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 PES1O00541 588 aaKnown RBP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 PPP1R37O75864 691 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 LSP1P33241 339 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 C6orf89Q6UWU4 347 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 MREGQ8N565 214 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 ARMC2Q8NEN0 867 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 NCOA7Q8NI08 942 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 CAGE1Q8TC20 777 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 ZNF473Q8WTR7 871 aaKnown RBP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 RSRC1Q96IZ7 334 aaKnown RBP18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 CD248Q9HCU0 757 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 HOMER3Q9NSC5 361 aa18.17■□□□□ 0.5
HMBOX1-212ENST00000558662 MST1RQ04912 1400 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 PRC1O43663 620 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 NEBLO76041 1014 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 TLDC1Q6P9B6 456 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 CCDC121Q6ZUS5 278 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 SND1Q7KZF4 910 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 CCDC155Q8N6L0 562 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 SH3GL3Q99963 347 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 SAMM50Q9Y512 469 aa18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.16■□□□□ 0.5
HMBOX1-212ENST00000558662 HMGB1P1B2RPK0 211 aaPredicted RBP18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 SH2B2O14492 632 aaPredicted RBP18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 ZFYP08048 801 aaPredicted RBP18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 SSR1P43307 286 aaKnown RBP18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 PTGISQ16647 500 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 PTPN21Q16825 1174 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 RILPL1Q5EBL4 403 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 CCDC170Q8IYT3 715 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 OR8K1Q8NGG5 319 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 MED15Q96RN5 788 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 PAG1Q9NWQ8 432 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 ECM29Q5VYK3 1845 aa18.15■□□□□ 0.5
HMBOX1-212ENST00000558662 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 ACTN4O43707 911 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 CYLC1P35663 651 aaPredicted RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 CLNS1AP54105 237 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 LACTB2Q53H82 288 aaPredicted RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 TRMT44Q8IYL2 757 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 CCHCR1Q8TD31 782 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 CPLX3Q8WVH0 158 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 TCP11Q8WWU5 503 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 FAM212AQ96EL1 285 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 NUP88Q99567 741 aaPredicted RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 PYM1Q9BRP8 204 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 ZNHIT6Q9NWK9 470 aaKnown RBP18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 NCKAP5LQ9HCH0 1330 aa18.14■□□□□ 0.5
HMBOX1-212ENST00000558662 A0A0U1RQJ8 604 aa18.14■□□□□ 0.49
HMBOX1-212ENST00000558662 A0A1W2PQC6 194 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms