RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 GPR25O00155 361 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 PRDM1O75626 825 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 CTDSPL2Q05D32 466 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 DGKZQ13574 1117 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 ZNF444Q8N0Y2 327 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-205ENST00000558428 PROCA1Q8NCQ7 364 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-205ENST00000558428 IL25Q9H293 177 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 TMOD4Q9NZQ9 345 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 AGTPBP1Q9UPW5 1226 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 GREB1LQ9C091 1923 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-205ENST00000558428 ICA1Q05084 483 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 ZYXQ15942 572 aaKnown RBP14.69□□□□□ -0.06
SMAD3-205ENST00000558428 TREML2Q5T2D2 321 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 USP17L2Q6R6M4 530 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 CLEC10AQ8IUN9 316 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 ACER1Q8TDN7 264 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 DSCC1Q9BVC3 393 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 ANAPC4Q9UJX5 808 aa14.69□□□□□ -0.06
SMAD3-205ENST00000558428 USP14P54578 494 aa14.68□□□□□ -0.06
SMAD3-205ENST00000558428 HAND2P61296 217 aa14.68□□□□□ -0.06
SMAD3-205ENST00000558428 NOM1Q5C9Z4 860 aaKnown RBP14.68□□□□□ -0.06
SMAD3-205ENST00000558428 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-205ENST00000558428 PARK7Q99497 189 aaKnown RBP14.68□□□□□ -0.06
SMAD3-205ENST00000558428 KIAA1683Q9H0B3 1180 aa14.68□□□□□ -0.06
SMAD3-205ENST00000558428 SLC45A1Q9Y2W3 748 aa14.68□□□□□ -0.06
SMAD3-205ENST00000558428 LAMA4Q16363 1823 aa14.68□□□□□ -0.06
SMAD3-205ENST00000558428 MYH4Q9Y623 1939 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 SGSM2O43147 1006 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 TLR2O60603 784 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 CYP2C8P10632 490 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 ATP2B2Q01814 1243 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 PABPC4Q13310 644 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMAD3-205ENST00000558428 COL13A1Q5TAT6 717 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-205ENST00000558428 KANSL2Q9H9L4 492 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 ARHGEF10LQ9HCE6 1279 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 INCENPQ9NQS7 918 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 EMILIN3Q9NT22 766 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
SMAD3-205ENST00000558428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMAD3-205ENST00000558428 A0A1W2PRG0 241 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 ZNF213O14771 459 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 FKTNO75072 461 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 TSPY3P0CV98 308 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 TSPY8P0CW00 308 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 OSBPP22059 807 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 FAM47AQ5JRC9 791 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMAD3-205ENST00000558428 TOMM22Q9NS69 142 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 CTNNA3Q9UI47 895 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 TACC3Q9Y6A5 838 aa14.66□□□□□ -0.06
SMAD3-205ENST00000558428 RANBP6O60518 1105 aaKnown RBP14.65□□□□□ -0.06
SMAD3-205ENST00000558428 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
SMAD3-205ENST00000558428 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-205ENST00000558428 TFAP4Q01664 338 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 SP3Q02447 781 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 SIAH1Q8IUQ4 282 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 NEDD1Q8NHV4 660 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 SMCR8Q8TEV9 937 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-205ENST00000558428 C12orf42Q96LP6 360 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 CPA4Q9UI42 421 aa14.65□□□□□ -0.06
SMAD3-205ENST00000558428 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 TSPY2A6NKD2 308 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 ORC4O43929 436 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 VCAM1P19320 739 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 HOXA7P31268 230 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-205ENST00000558428 PTH1RQ03431 593 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
SMAD3-205ENST00000558428 RRP12Q5JTH9 1297 aaKnown RBP14.64□□□□□ -0.07
SMAD3-205ENST00000558428 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 MFSD6Q6ZSS7 791 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 TBC1D10CQ8IV04 446 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 STAG1Q8WVM7 1258 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 ESYT1Q9BSJ8 1104 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 ASCC2Q9H1I8 757 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-205ENST00000558428 RNF41Q9H4P4 317 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-205ENST00000558428 TMX2Q9Y320 296 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 ADGRA2Q96PE1 1338 aa14.64□□□□□ -0.07
SMAD3-205ENST00000558428 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 RAD21O60216 631 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 CDC45O75419 566 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 FGRP09769 529 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 PCP11498 1178 aaKnown RBP14.63□□□□□ -0.07
SMAD3-205ENST00000558428 CASC1Q6TDU7 716 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 C17orf99Q6UX52 265 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 KIAA1211Q6ZU35 1233 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 CEP95Q96GE4 821 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 VCPKMTQ9H867 229 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 NYAP2Q9P242 653 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L15C9J2P7 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L13C9JLJ4 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L11C9JVI0 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L18D6R9N7 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L22D6RA61 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L17D6RBQ6 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L19D6RCP7 530 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms