RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CDC45O75419 566 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
TPM1-212ENST00000558347 CYP2D6P10635 497 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 MCM4P33991 863 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 DDIT3P35638 169 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 GABPAQ06546 454 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 UBE3CQ15386 1083 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 ANKRD13CQ8N6S4 541 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 SH3TC2Q8TF17 1288 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 SRRDQ9UH36 339 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 PNMA3Q9UL41 463 aa12.27□□□□□ -0.45
TPM1-212ENST00000558347 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
TPM1-212ENST00000558347 PTMSP20962 102 aa12.26□□□□□ -0.45
TPM1-212ENST00000558347 PRMT2P55345 433 aa12.26□□□□□ -0.45
TPM1-212ENST00000558347 CERKLQ49MI3 558 aaPredicted RBP12.26□□□□□ -0.45
TPM1-212ENST00000558347 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
TPM1-212ENST00000558347 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
TPM1-212ENST00000558347 MYPNQ86TC9 1320 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 SMIM22K7EJ46 135 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 MYCP01106 439 aaPredicted RBP12.25□□□□□ -0.45
TPM1-212ENST00000558347 GUCY1A2P33402 732 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 FCGRTP55899 365 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 PRKCZQ05513 592 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 PABPC4Q13310 644 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■□□□□ 11.2
TPM1-212ENST00000558347 ABCB5Q2M3G0 1257 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 TMOD4Q9NZQ9 345 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 GABRQQ9UN88 632 aa12.25□□□□□ -0.45
TPM1-212ENST00000558347 HOXD10P28358 340 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 FAM110CQ1W6H9 321 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 ZSCAN25Q6NSZ9 544 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 TICAM2Q86XR7 235 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 SLC44A5Q8NCS7 719 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 DYNLL2Q96FJ2 89 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
TPM1-212ENST00000558347 MYH8P13535 1937 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 CYP2D7A0A087X1C5 515 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 PEX10O60683 326 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 EN2P19622 333 aaPredicted RBP12.23□□□□□ -0.45
TPM1-212ENST00000558347 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
TPM1-212ENST00000558347 ZYXQ15942 572 aaKnown RBP12.23□□□□□ -0.45
TPM1-212ENST00000558347 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 RAET1EQ8TD07 263 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 ACER1Q8TDN7 264 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 P2RX7Q99572 595 aaKnown RBP12.23□□□□□ -0.45
TPM1-212ENST00000558347 CABP5Q9NP86 173 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 SLC4A4Q9Y6R1 1079 aa12.23□□□□□ -0.45
TPM1-212ENST00000558347 KIAA0100Q14667 2235 aaKnown RBP12.23□□□□□ -0.45
TPM1-212ENST00000558347 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
TPM1-212ENST00000558347 GRK4P32298 578 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 GCLCP48506 637 aaPredicted RBP12.22□□□□□ -0.45
TPM1-212ENST00000558347 IRX3P78415 501 aaPredicted RBP12.22□□□□□ -0.45
TPM1-212ENST00000558347 SEPT2Q15019 361 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 MTFR1Q15390 333 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 CASC1Q6TDU7 716 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 DOCK3Q8IZD9 2030 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 OSBP2Q969R2 916 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 KIF2CQ99661 725 aa12.22□□□□□ -0.45
TPM1-212ENST00000558347 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
TPM1-212ENST00000558347 USP17L12C9JPN9 530 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 USP17L21D6R901 530 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 FLT3LGP49771 235 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 HERVK_113P62684 666 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 RILPL2Q969X0 211 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
TPM1-212ENST00000558347 FEZ1Q99689 392 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 TXNRD2Q9NNW7 524 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 SWAP70Q9UH65 585 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
TPM1-212ENST00000558347 A0A1W2PRG0 241 aa12.21□□□□□ -0.46
TPM1-212ENST00000558347 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.46
TPM1-212ENST00000558347 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.46
TPM1-212ENST00000558347 CHMLP26374 656 aa12.21□□□□□ -0.46
TPM1-212ENST00000558347 CTR9Q6PD62 1173 aa12.21□□□□□ -0.46
TPM1-212ENST00000558347 APPBP2Q92624 585 aa12.21□□□□□ -0.46
TPM1-212ENST00000558347 MORF4L1Q9UBU8 362 aa12.21□□□□□ -0.46
TPM1-212ENST00000558347 PLXNB2O15031 1838 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 K7ELQ4 463 aaPredicted RBP12.2□□□□□ -0.46
TPM1-212ENST00000558347 M0R2C6 588 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 AKR1B1P15121 316 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 ELNP15502 786 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 VCAM1P19320 739 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 CDK8P49336 464 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 USP14P54578 494 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 RABEP1Q15276 862 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms