RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 RNF113AO15541 343 aaKnown RBP14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 CCL5P13501 91 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 ELNP15502 786 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 MTFR1Q15390 333 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 C12orf60Q5U649 245 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 GTF3C2Q8WUA4 911 aaPredicted RBP14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 PAGR1Q9BTK6 254 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 MORF4L1Q9UBU8 362 aa14.86□□□□□ -0.03
CDC42BPB-202ENST00000558321 GLRX3O76003 335 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 GUCY1A2P33402 732 aa14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 IRF5Q13568 498 aa14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 TMEM179Q6ZVK1 233 aa14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 APPBP2Q92624 585 aa14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 C12orf42Q96LP6 360 aa14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 STRBPQ96SI9 672 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 RNF208Q9H0X6 261 aa14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-202ENST00000558321 LOC285556D6RIA3 1793 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 PEX10O60683 326 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 APPP05067 770 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 MX1P20591 662 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 CDK8P49336 464 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 CATSPERGQ6ZRH7 1159 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 NKX2-3Q8TAU0 364 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 OTUD7AQ8TE49 926 aaPredicted RBP14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 PXYLP1Q8TE99 480 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 OSBP2Q969R2 916 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 CCDC17Q96LX7 622 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 FSD1Q9BTV5 496 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 ARHGEF10LQ9HCE6 1279 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 TXNRD2Q9NNW7 524 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
CDC42BPB-202ENST00000558321 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 INHAP05111 366 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 AKR1B1P15121 316 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 VCAM1P19320 739 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 ERVK-9P63128 1117 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 ERVK-24P63145 666 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 STK11IPQ8N1F8 1099 aa14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 RPAP3Q9H6T3 665 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 ARPP21Q9UBL0 812 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPB-202ENST00000558321 NAV1Q8NEY1 1877 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 A0A1W2PRG0 241 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 SMIM22K7EJ46 135 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 GPAA1O43292 621 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 GJB1P08034 283 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 GNAT2P19087 354 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 MAPK4P31152 587 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 TDO2P48775 406 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 AAMPQ13685 434 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 Q3C1V9 767 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 PRPF38BQ5VTL8 546 aaKnown RBP14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 GIMAP6Q6P9H5 292 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 C16orf86Q6ZW13 317 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 PI4K2BQ8TCG2 481 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 NUDT12Q9BQG2 462 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 UNC93B1Q9H1C4 597 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 RWDD1Q9H446 243 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 SH2D4AQ9H788 454 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 MKNK2Q9HBH9 465 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 GJD2Q9UKL4 321 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 RABGAP1Q9Y3P9 1069 aa14.82□□□□□ -0.04
CDC42BPB-202ENST00000558321 HTTP42858 3142 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 GSG1L2A8MUP6 293 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 CYP2B6P20813 491 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 CCNA1P78396 465 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 ICA1Q05084 483 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 NACAP1Q9BZK3 213 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 HOXC10Q9NYD6 342 aa14.81□□□□□ -0.04
CDC42BPB-202ENST00000558321 PATL2C9JE40 543 aaKnown RBP14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 M0R2C6 588 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 RAD21O60216 631 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 GJA8P48165 433 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 COG2Q14746 738 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 PLEKHH3Q7Z736 793 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 PORCNQ9H237 461 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 KANSL2Q9H9L4 492 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 TMX2Q9Y320 296 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 TNRC18O15417 2968 aaPredicted RBP14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 MGAMO43451 1857 aa14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 KIAA0100Q14667 2235 aaKnown RBP14.8□□□□□ -0.04
CDC42BPB-202ENST00000558321 DDX60LQ5H9U9 1706 aaKnown RBP14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 CLEC10AQ8IUN9 316 aa14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 SIAH1Q8IUQ4 282 aa14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 SPICE1Q8N0Z3 855 aa14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 SOCS4Q8WXH5 440 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms