RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.54□□□□□ -0.24
RORA-207ENST00000558234 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
RORA-207ENST00000558234 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
RORA-207ENST00000558234 C12orf42Q96LP6 360 aa13.54□□□□□ -0.24
RORA-207ENST00000558234 MIGA2Q7L4E1 593 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 CCDC17Q96LX7 622 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
RORA-207ENST00000558234 ZSWIM5Q9P217 1185 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 SMARCC2Q8TAQ2 1214 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.53□□□□□ -0.24
RORA-207ENST00000558234 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 BRD1O95696 1058 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 APLP1P51693 650 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 KIAA1755Q5JYT7 1200 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 CLMNQ96JQ2 1002 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
RORA-207ENST00000558234 A0A1W2PRG0 241 aa13.52□□□□□ -0.24
RORA-207ENST00000558234 POLR3DP05423 398 aaPredicted RBP13.52□□□□□ -0.24
RORA-207ENST00000558234 SLC10A3P09131 477 aa13.52□□□□□ -0.24
RORA-207ENST00000558234 HAND2P61296 217 aa13.52□□□□□ -0.24
RORA-207ENST00000558234 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
RORA-207ENST00000558234 NFKBIBQ15653 356 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.25
RORA-207ENST00000558234 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 NYAP2Q9P242 653 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 ZSWIM8A7E2V4 1837 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 BLOC1S2Q6QNY1 142 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
RORA-207ENST00000558234 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.25
RORA-207ENST00000558234 LY9Q9HBG7 655 aa13.52□□□□□ -0.25
RORA-207ENST00000558234 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 A0A0G2JLL6 359 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 TMEM88BA6NKF7 163 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 PFKFB2O60825 505 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 PPATQ06203 517 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 PRRT2Q7Z6L0 340 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 GMCL1P1Q8NEA9 526 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 GTF3C6Q969F1 213 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 PPIL2Q13356 520 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 CERKLQ49MI3 558 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 Q6ZUG5 572 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
RORA-207ENST00000558234 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 KRT23Q9C075 422 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 SENP2Q9HC62 589 aa13.51□□□□□ -0.25
RORA-207ENST00000558234 MINDY4BA8MYZ0 360 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
RORA-207ENST00000558234 NMT2O60551 498 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 APPP05067 770 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 PDE4BQ07343 736 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 MFSD6Q6ZSS7 791 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
RORA-207ENST00000558234 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
RORA-207ENST00000558234 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 GPAT2Q6NUI2 795 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 WNK4Q96J92 1243 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
RORA-207ENST00000558234 B4E1Z4 1266 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 LIFRP42702 1097 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 PRDM1O75626 825 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 GH2P01242 217 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 SCRN1Q12765 414 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 GDF11O95390 407 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 ASNSP08243 561 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 MAP3K14Q99558 947 aa13.49□□□□□ -0.25
RORA-207ENST00000558234 SEPT2Q15019 361 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 DNAJC5GQ8N7S2 189 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 TCEANC2Q96MN5 208 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 ZSCAN10Q96SZ4 725 aaPredicted RBP13.48□□□□□ -0.25
RORA-207ENST00000558234 CFHR5Q9BXR6 569 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 TFAP4Q01664 338 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 SLC35G1Q2M3R5 365 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 FAM47AQ5JRC9 791 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 SPRYD7Q5W111 196 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
RORA-207ENST00000558234 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms