RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 GBP7Q8N8V2 638 aaPredicted RBP12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 CCHCR1Q8TD31 782 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 TSR2Q969E8 191 aaKnown RBP12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 RUNDC1Q96C34 613 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 PGBD1Q96JS3 809 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 NSD2O96028 1365 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 FAM173BQ6P4H8 233 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 SYT15Q9BQS2 421 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 SETD1AO15047 1707 aaKnown RBP12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 ABLIM1O14639 778 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 DTNBO60941 627 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 VIMP08670 466 aaKnown RBP12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 ANO7Q6IWH7 933 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 TEX9Q8N6V9 391 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 CROTQ9UKG9 612 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 CLTAP09496 248 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 EXOSC9Q06265 439 aaKnown RBP12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 FAAH2Q6GMR7 532 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 HSPA4P34932 840 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 USP11P51784 963 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 LBRQ14739 615 aaKnown RBP12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 TOGARAM2Q6ZUX3 1019 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 BHMTQ93088 406 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
SEMA4B-204ENST00000558065 CUL7Q14999 1698 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 TMCC1O94876 653 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 CCDC166P0CW27 439 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 ALADP13716 330 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 ZFXP17010 805 aaPredicted RBP12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 POLE2P56282 527 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 GOLGA8FQ08AF8 430 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 GOLGA8DPQ0D2H9 430 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 TTMPQ5BVD1 217 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 MKS1Q9NXB0 559 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 GJB2P29033 226 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 PDE4BQ07343 736 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 MAATS1Q7Z4T9 603 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 GDAP1L1Q96MZ0 367 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 NDST4Q9H3R1 872 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 DCTPP1Q9H773 170 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 PTGISQ16647 500 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 FOXB2Q5VYV0 432 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 NLRP14Q86W24 1093 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 TTC14Q96N46 770 aa12.31□□□□□ -0.44
SEMA4B-204ENST00000558065 CCNG1P51959 295 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 FXNQ16595 210 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 SPECC1Q5M775 1068 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ZMYM1Q5SVZ6 1142 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ZNF362Q5T0B9 420 aaPredicted RBP12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 SRPK1Q96SB4 655 aaKnown RBP12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 MPHOSPH6Q99547 160 aaKnown RBP12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 OSBPL10Q9BXB5 764 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ABCC5O15440 1437 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 TMEM247A6NEH6 219 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 IDO1P14902 403 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 MCM3P25205 808 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ALS2CLQ60I27 953 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 CREB3L3Q68CJ9 461 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 CCDC70Q6NSX1 233 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 KIFAP3Q92845 792 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 FAM107AO95990 144 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 A1BGP04217 495 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 SEC24CP53992 1094 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 USP46P62068 366 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ANKRD20A2Q5SQ80 823 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ANKRD20A1Q5TYW2 823 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 RNF220Q5VTB9 566 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 SMC1BQ8NDV3 1235 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 LINS1Q8NG48 757 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 MTMR7Q9Y216 660 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
SEMA4B-204ENST00000558065 LARGE1O95461 756 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 BCRP11274 1271 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 GSTM4Q03013 218 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 HIBCHQ6NVY1 386 aaPredicted RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 SELENOOQ9BVL4 669 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 MRPL44Q9H9J2 332 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 KCNMB3Q9NPA1 279 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 TMED5Q9Y3A6 229 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 GOLGA6L4A6NEF3 574 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms