RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 STX17P56962 302 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 MAP3K12Q12852 859 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 MCM6Q14566 821 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 MTA3Q9BTC8 594 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 CASP14P31944 242 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 AFMP43652 599 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 OXER1Q8TDS5 423 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 GBP3Q9H0R5 595 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 PDE11AQ9HCR9 933 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 FEZ2Q9UHY8 353 aaPredicted RBP13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 TACC3Q9Y6A5 838 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 MYH8P13535 1937 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 ITIH6Q6UXX5 1313 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 XBP1P17861 261 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 SH3RF1Q7Z6J0 888 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 MAGEB6Q8N7X4 407 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 PAGE5Q96GU1 130 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 PNKPQ96T60 521 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 ARMT1Q9H993 441 aa13.41□□□□□ -0.26
VIPAS39-211ENST00000557658 A0A0U1RQJ8 604 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 GSG1L2A8MUP6 293 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 TUBBP07437 444 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 FECHP22830 423 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 TDO2P48775 406 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 PIP4K2BP78356 416 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 WHAMMP3Q1A5X7 153 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 TOM1L2Q6ZVM7 507 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 SLC35F6Q8N357 371 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 NAPGQ99747 312 aaPredicted RBP13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 VPS18Q9P253 973 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 MYO1AQ9UBC5 1043 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 CTAGE15A4D2H0 777 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 CTAGE8P0CG41 777 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 GNAT2P19087 354 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 ACTN2P35609 894 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 AKAP17AQ02040 695 aaKnown RBP13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 LEKR1Q6ZMV7 388 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 CTAGE6Q86UF2 777 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 NLRP10Q86W26 655 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 CTAGE4Q8IX94 777 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 SPATA5Q8NB90 893 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 LPIN2Q92539 896 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 ABCB6Q9NP58 842 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 L1RE1Q9UN81 338 aa13.4□□□□□ -0.26
VIPAS39-211ENST00000557658 A0A087X0B3 334 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 BMP15O95972 392 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 GYPCP04921 128 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 GPTP24298 496 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 DPYDQ12882 1025 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 EPSTI1Q96J88 318 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
VIPAS39-211ENST00000557658 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 KRT2P35908 639 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 CYP26C1Q6V0L0 522 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 ACRBPQ8NEB7 543 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 ACBD3Q9H3P7 528 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 ARAP2Q8WZ64 1704 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 N4BP3O15049 544 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 IVLP07476 585 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 CASP1P29466 404 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 SPAG1Q07617 926 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 TRIM14Q14142 442 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 HSP90B2PQ58FF3 399 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 SMYD4Q8IYR2 804 aaPredicted RBP13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 CTNND2Q9UQB3 1225 aa13.38□□□□□ -0.27
VIPAS39-211ENST00000557658 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 PRKAB2O43741 272 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 STARD3NLO95772 234 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 SLC5A1P13866 664 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms