RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 PDCP20941 246 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
GABRB3-212ENST00000557641 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
GABRB3-212ENST00000557641 C9orf131Q5VYM1 1079 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 APOA5Q6Q788 366 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 CRACR2BQ8N4Y2 399 aaPredicted RBP11.99□□□□□ -0.49
GABRB3-212ENST00000557641 GPRC5DQ9NZD1 345 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 BRPF3Q9ULD4 1205 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 LAMB1P07942 1786 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 NAV1Q8NEY1 1877 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 NID2Q14112 1375 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 SMIM22K7EJ46 135 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 CDKL5O76039 1030 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 DDAH1O94760 285 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 LMOD1P29536 600 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-212ENST00000557641 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.49
GABRB3-212ENST00000557641 CACNB3P54284 484 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 SCRN1Q12765 414 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 TCP10Q12799 353 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 STK3Q13188 491 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 KIF4BQ2VIQ3 1234 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 FAM47AQ5JRC9 791 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 CATIPQ7Z7H3 387 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-212ENST00000557641 NECAB1Q8N987 351 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 MAP3K14Q99558 947 aa11.98□□□□□ -0.49
GABRB3-212ENST00000557641 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-212ENST00000557641 NAP1L2Q9ULW6 460 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-212ENST00000557641 FOCADQ5VW36 1801 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 CLRN2A0PK11 232 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 DDTLA6NHG4 134 aaPredicted RBP11.97□□□□□ -0.49
GABRB3-212ENST00000557641 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 CPLX1O14810 134 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 TBC1D12O60347 775 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 NOVP48745 357 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 SLC4A8Q2Y0W8 1093 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 NBPF9Q3BBW0 867 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 SH3BP5LQ7L8J4 393 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 ZNF654Q8IZM8 581 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 NKX2-3Q8TAU0 364 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 HOOK2Q96ED9 719 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 CSRNP1Q96S65 589 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 KAT14Q9H8E8 782 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 VEZTQ9HBM0 779 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
GABRB3-212ENST00000557641 BAZ2AQ9UIF9 1905 aaKnown RBP11.97□□□□□ -0.49
GABRB3-212ENST00000557641 GOLGA8AA7E2F4 631 aa11.96□□□□□ -0.49
GABRB3-212ENST00000557641 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-212ENST00000557641 GJB2P29033 226 aa11.96□□□□□ -0.49
GABRB3-212ENST00000557641 SHMT1P34896 483 aa11.96□□□□□ -0.49
GABRB3-212ENST00000557641 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
GABRB3-212ENST00000557641 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.49
GABRB3-212ENST00000557641 SLC44A5Q8NCS7 719 aa11.96□□□□□ -0.49
GABRB3-212ENST00000557641 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-212ENST00000557641 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
GABRB3-212ENST00000557641 RBM28Q9NW13 759 aaKnown RBP11.96□□□□□ -0.49
GABRB3-212ENST00000557641 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
GABRB3-212ENST00000557641 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.5
GABRB3-212ENST00000557641 CNTNAP1P78357 1384 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 IGKV6D-41A0A0C4DH26 115 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 KIF5BP33176 963 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 CCT2P78371 535 aaKnown RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 MAP3K10Q02779 954 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 RAB3GAP1Q15042 981 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 RTN1Q16799 776 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 CERKLQ49MI3 558 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 TBC1D10BQ4KMP7 808 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 RCSD1Q6JBY9 416 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 SAMD7Q7Z3H4 446 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 GINM1Q9NU53 330 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
GABRB3-212ENST00000557641 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
GABRB3-212ENST00000557641 MYH1P12882 1939 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 PITPNM2Q9BZ72 1349 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 DDNO94850 711 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-212ENST00000557641 IFNAR1P17181 557 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 EPS15P42566 896 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 GNAQP50148 359 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 TROAPQ12815 778 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms