RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 USP17L22D6RA61 530 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 USP17L17D6RBQ6 530 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 USP17L19D6RCP7 530 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 USP17L20D6RJB6 530 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 GH2P01242 217 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 PTPREP23469 700 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 USP17L24Q0WX57 530 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 LBX2Q6XYB7 198 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 SNRKQ9NRH2 765 aa22.49■■□□□ 1.19
ABCD4-228ENST00000557588 SAP30BPQ9UHR5 308 aaKnown RBP22.49■■□□□ 1.19
ABCD4-228ENST00000557588 PNMA6EA0A0J9YXQ4 647 aa22.48■■□□□ 1.19
ABCD4-228ENST00000557588 IGHA2P01877 340 aa22.48■■□□□ 1.19
ABCD4-228ENST00000557588 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
ABCD4-228ENST00000557588 RARSP54136 660 aaKnown RBP22.48■■□□□ 1.19
ABCD4-228ENST00000557588 G3BP1Q13283 466 aaKnown RBP eCLIP22.48■■□□□ 1.19
ABCD4-228ENST00000557588 GRB14Q14449 540 aa22.48■■□□□ 1.19
ABCD4-228ENST00000557588 ZNF697Q5TEC3 545 aa22.48■■□□□ 1.19
ABCD4-228ENST00000557588 FEZ1Q99689 392 aa22.48■■□□□ 1.19
ABCD4-228ENST00000557588 GPR108Q9NPR9 543 aa22.48■■□□□ 1.19
ABCD4-228ENST00000557588 GNAI2P04899 355 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 TTC39AQ5SRH9 613 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 TATDN1Q6P1N9 297 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 CATSPERGQ6ZRH7 1159 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 ZNF512BQ96KM6 892 aaPredicted RBP22.47■■□□□ 1.19
ABCD4-228ENST00000557588 FAM161BQ96MY7 647 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 KIAA1683Q9H0B3 1180 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 PRKAG2Q9UGJ0 569 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 A0A0G2JMZ2 1700 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 PRUNE2Q8WUY3 3088 aa22.47■■□□□ 1.19
ABCD4-228ENST00000557588 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
ABCD4-228ENST00000557588 VCAM1P19320 739 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 ATN1P54259 1190 aaPredicted RBP22.46■■□□□ 1.19
ABCD4-228ENST00000557588 USP14P54578 494 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 RTP1P59025 263 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 ZYXQ15942 572 aaKnown RBP22.46■■□□□ 1.19
ABCD4-228ENST00000557588 TNNI3KQ59H18 835 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 DBNDD2Q9BQY9 259 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 EHD4Q9H223 541 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 FPGT-TNNI3KV9GXZ4 949 aa22.46■■□□□ 1.19
ABCD4-228ENST00000557588 CYBAP13498 195 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 ATP2B2Q01814 1243 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 CCDC158Q5M9N0 1113 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 WDR78Q5VTH9 848 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 TRPV1Q8NER1 839 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 BTBD7Q9P203 1132 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 IVNS1ABPQ9Y6Y0 642 aa22.45■■□□□ 1.18
ABCD4-228ENST00000557588 SPDYE16A6NNV3 312 aaPredicted RBP22.44■■□□□ 1.18
ABCD4-228ENST00000557588 CNGA1P29973 690 aa22.44■■□□□ 1.18
ABCD4-228ENST00000557588 CYP2C19P33261 490 aa22.44■■□□□ 1.18
ABCD4-228ENST00000557588 DYNLL1P63167 89 aaKnown RBP22.44■■□□□ 1.18
ABCD4-228ENST00000557588 NPLOC4Q8TAT6 608 aa22.44■■□□□ 1.18
ABCD4-228ENST00000557588 PIH1D3Q9NQM4 214 aaKnown RBP22.44■■□□□ 1.18
ABCD4-228ENST00000557588 SERPINB13Q9UIV8 391 aa22.44■■□□□ 1.18
ABCD4-228ENST00000557588 CERS3Q8IU89 383 aa22.43■■□□□ 1.18
ABCD4-228ENST00000557588 CDX2Q99626 313 aaPredicted RBP22.43■■□□□ 1.18
ABCD4-228ENST00000557588 ZAP70P43403 619 aa22.42■■□□□ 1.18
ABCD4-228ENST00000557588 SNX17Q15036 470 aa22.42■■□□□ 1.18
ABCD4-228ENST00000557588 OLFML2BQ68BL8 750 aa22.42■■□□□ 1.18
ABCD4-228ENST00000557588 ATP11BQ9Y2G3 1177 aa22.42■■□□□ 1.18
ABCD4-228ENST00000557588 TRIM27P14373 513 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 CYP7A1P22680 504 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 RAB3GAP1Q15042 981 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 SHHQ15465 462 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 ARRDC4Q8NCT1 418 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 MAFAQ8NHW3 353 aaPredicted RBP22.41■■□□□ 1.18
ABCD4-228ENST00000557588 ACER1Q8TDN7 264 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 MUC3AQ02505 3323 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 NAV1Q8NEY1 1877 aa22.41■■□□□ 1.18
ABCD4-228ENST00000557588 POLA2Q14181 598 aa22.4■■□□□ 1.18
ABCD4-228ENST00000557588 ABCB5Q2M3G0 1257 aa22.4■■□□□ 1.18
ABCD4-228ENST00000557588 C9orf50Q5SZB4 431 aa22.4■■□□□ 1.18
ABCD4-228ENST00000557588 GJC2Q5T442 439 aaPredicted RBP22.4■■□□□ 1.18
ABCD4-228ENST00000557588 RPAP3Q9H6T3 665 aaPredicted RBP22.4■■□□□ 1.18
ABCD4-228ENST00000557588 KBTBD13C9JR72 458 aa22.39■■□□□ 1.17
ABCD4-228ENST00000557588 USP5P45974 858 aa22.39■■□□□ 1.17
ABCD4-228ENST00000557588 SMAD3P84022 425 aaKnown RBP22.39■■□□□ 1.17
ABCD4-228ENST00000557588 CERKLQ49MI3 558 aaPredicted RBP22.39■■□□□ 1.17
ABCD4-228ENST00000557588 SLC39A5Q6ZMH5 540 aa22.39■■□□□ 1.17
ABCD4-228ENST00000557588 MIGA1Q8NAN2 632 aa22.39■■□□□ 1.17
ABCD4-228ENST00000557588 SEMA6BQ9H3T3 888 aa22.39■■□□□ 1.17
ABCD4-228ENST00000557588 DBNLQ9UJU6 430 aaKnown RBP22.39■■□□□ 1.17
ABCD4-228ENST00000557588 TTC28Q96AY4 2481 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 SEPT4O43236 478 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 ADORA2AP29274 412 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 SHMT1P34896 483 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 TRIM60Q495X7 471 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 TTC6Q86TZ1 520 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 PDLIM7Q9NR12 457 aa22.38■■□□□ 1.17
ABCD4-228ENST00000557588 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
ABCD4-228ENST00000557588 STRNO43815 780 aa22.37■■□□□ 1.17
ABCD4-228ENST00000557588 IDH1O75874 414 aaKnown RBP22.37■■□□□ 1.17
ABCD4-228ENST00000557588 GUCY1A2P33402 732 aa22.37■■□□□ 1.17
ABCD4-228ENST00000557588 TMED8Q6PL24 325 aaPredicted RBP22.37■■□□□ 1.17
ABCD4-228ENST00000557588 SHCBP1Q8NEM2 672 aa22.37■■□□□ 1.17
ABCD4-228ENST00000557588 SSH3Q8TE77 659 aa22.37■■□□□ 1.17
ABCD4-228ENST00000557588 MOV10L1Q9BXT6 1211 aaKnown RBP22.37■■□□□ 1.17
ABCD4-228ENST00000557588 TTYH1Q9H313 450 aaPredicted RBP22.37■■□□□ 1.17
ABCD4-228ENST00000557588 CABP5Q9NP86 173 aa22.37■■□□□ 1.17
ABCD4-228ENST00000557588 PRDM5Q9NQX1 630 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms