RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ANKRD13CQ8N6S4 541 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 TDRD7Q8NHU6 1098 aaKnown RBP8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 PLA2G12BQ9BX93 195 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 MUC6Q6W4X9 2439 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 LILRB3O75022 631 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 MAP3K21Q5TCX8 1036 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 ZDHHC15Q96MV8 337 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 IL21Q9HBE4 155 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 THEGQ9P2T0 379 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 ZHX2Q9Y6X8 837 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 PLXNB2O15031 1838 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 MYO9BQ13459 2157 aa8.58□□□□□ -1.04
SPTLC2-206ENST00000557566 XIRP2A4UGR9 3374 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 NEURL1BA8MQ27 555 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 H7C1W4 665 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 NR1I2O75469 434 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 CSF1RP07333 972 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 NDUFV2P19404 249 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 HIBADHP31937 336 aaKnown RBP8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 RFC5P40937 340 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 KCNC4Q03721 635 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 CWF19L2Q2TBE0 894 aaKnown RBP8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 C9orf50Q5SZB4 431 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 KSR2Q6VAB6 950 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 TRIB2Q92519 343 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 PICK1Q9NRD5 415 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 PHIPQ8WWQ0 1821 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 DOCK2Q92608 1830 aa8.57□□□□□ -1.04
SPTLC2-206ENST00000557566 MAST3O60307 1309 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 DOCK1Q14185 1865 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 PI4KAP2A4QPH2 592 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 MRPS5P82675 430 aaKnown RBP8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 IFIT5Q13325 482 aaKnown RBP8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 TRMT44Q8IYL2 757 aaKnown RBP8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 SCYL3Q8IZE3 742 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 PI4KAP1Q8N8J0 262 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 FAM151AQ8WW52 585 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 HLA-CQ95604 372 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 MRIQ9BWK5 157 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 SENP6Q9GZR1 1112 aaPredicted RBP8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 GJD2Q9UKL4 321 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 AGTPBP1Q9UPW5 1226 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 AFG3L2Q9Y4W6 797 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
SPTLC2-206ENST00000557566 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 LCE2BO14633 110 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 TLL1O43897 1013 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 PLIN1O60240 522 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 FDX1P10109 184 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 ZKSCAN1P17029 563 aaPredicted RBP8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 PTPRAP18433 802 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 CYP2B6P20813 491 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 GYG1P46976 350 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 GCLCP48506 637 aaPredicted RBP8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 MCM6Q14566 821 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 LAPTM4AQ15012 233 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 GRIK5Q16478 980 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 CSPP1Q1MSJ5 1256 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 PPM1EQ8WY54 764 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 GAS2L1Q99501 681 aaPredicted RBP8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 MBIPQ9NS73 344 aa8.55□□□□□ -1.04
SPTLC2-206ENST00000557566 RLFQ13129 1914 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 REV3LO60673 3130 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 LOC285556D6RIA3 1793 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 ELL2O00472 640 aaPredicted RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 FRAT2O75474 233 aaPredicted RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 RTP1P59025 263 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 HNRNPUQ00839 825 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CACNB2Q08289 660 aaPredicted RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 TCP10Q12799 353 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CHAF1AQ13111 956 aaPredicted RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 UBE4AQ14139 1066 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 GCKRQ14397 625 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 TRAF7Q6Q0C0 670 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 HHIPL2Q6UWX4 724 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 ALYREFQ86V81 257 aaKnown RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 SOCS4Q8WXH5 440 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 FAM84BQ96KN1 310 aaPredicted RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 LRFN3Q9BTN0 628 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 MYH16Q9H6N6 1097 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 PRDM5Q9NQX1 630 aaPredicted RBP8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CNNM1Q9NRU3 951 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CHMP3Q9Y3E7 222 aa8.54□□□□□ -1.04
SPTLC2-206ENST00000557566 CHD9Q3L8U1 2897 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms