RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
NPC2-209ENST00000557510 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
NPC2-209ENST00000557510 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
NPC2-209ENST00000557510 ZNF512BQ96KM6 892 aaPredicted RBP11.07□□□□□ -0.64
NPC2-209ENST00000557510 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
NPC2-209ENST00000557510 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
NPC2-209ENST00000557510 DDX60LQ5H9U9 1706 aaKnown RBP11.06□□□□□ -0.64
NPC2-209ENST00000557510 SEC24BO95487 1268 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 BAG3O95817 575 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 UBXN2AP68543 259 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 TRIM32Q13049 653 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 IRF5Q13568 498 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 SH3D19Q5HYK7 790 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 CEP85Q6P2H3 762 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
NPC2-209ENST00000557510 MIGA1Q8NAN2 632 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 NOL10Q9BSC4 688 aaKnown RBP11.06□□□□□ -0.64
NPC2-209ENST00000557510 ANTXR1Q9H6X2 564 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 HERC5Q9UII4 1024 aaKnown RBP11.06□□□□□ -0.64
NPC2-209ENST00000557510 PNMA3Q9UL41 463 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 EXOC6BQ9Y2D4 811 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
NPC2-209ENST00000557510 IDH1O75874 414 aaKnown RBP11.05□□□□□ -0.64
NPC2-209ENST00000557510 FARP2O94887 1054 aaPredicted RBP11.05□□□□□ -0.64
NPC2-209ENST00000557510 SGPL1O95470 568 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 CYP7A1P22680 504 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 PXYLP1Q8TE99 480 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 DPF3Q92784 378 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 DEFB118Q96PH6 123 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 DHX36Q9H2U1 1008 aaKnown RBP11.05□□□□□ -0.64
NPC2-209ENST00000557510 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 GJD2Q9UKL4 321 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
NPC2-209ENST00000557510 C7P10643 843 aa11.04□□□□□ -0.64
NPC2-209ENST00000557510 GCLCP48506 637 aaPredicted RBP11.04□□□□□ -0.64
NPC2-209ENST00000557510 BACE1P56817 501 aa11.04□□□□□ -0.64
NPC2-209ENST00000557510 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
NPC2-209ENST00000557510 CRACR2BQ8N4Y2 399 aaPredicted RBP11.04□□□□□ -0.64
NPC2-209ENST00000557510 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
NPC2-209ENST00000557510 DIS3LQ8TF46 1054 aaKnown RBP11.04□□□□□ -0.64
NPC2-209ENST00000557510 COA7Q96BR5 231 aa11.04□□□□□ -0.64
NPC2-209ENST00000557510 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
NPC2-209ENST00000557510 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
NPC2-209ENST00000557510 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
NPC2-209ENST00000557510 DPYSL4O14531 572 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 ASNSP08243 561 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 AACSQ86V21 672 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 FOXP4Q8IVH2 680 aaPredicted RBP11.03□□□□□ -0.64
NPC2-209ENST00000557510 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
NPC2-209ENST00000557510 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 IL1RAPL2Q9NP60 686 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 MORF4L1Q9UBU8 362 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
NPC2-209ENST00000557510 MYH8P13535 1937 aa11.02□□□□□ -0.65
NPC2-209ENST00000557510 BAZ2AQ9UIF9 1905 aaKnown RBP11.02□□□□□ -0.65
NPC2-209ENST00000557510 GH2P01242 217 aa11.02□□□□□ -0.65
NPC2-209ENST00000557510 TFRCP02786 760 aaKnown RBP11.02□□□□□ -0.65
NPC2-209ENST00000557510 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
NPC2-209ENST00000557510 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.65
NPC2-209ENST00000557510 PABPC4Q13310 644 aaKnown RBP eCLIP11.02□□□□□ -0.653e-7■■■■■ 35.2
NPC2-209ENST00000557510 TRIB2Q92519 343 aa11.02□□□□□ -0.65
NPC2-209ENST00000557510 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.02□□□□□ -0.65
NPC2-209ENST00000557510 PRO3102Q9H379 93 aa11.02□□□□□ -0.65
NPC2-209ENST00000557510 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.65
NPC2-209ENST00000557510 RBPJLQ9UBG7 517 aa11.02□□□□□ -0.65
NPC2-209ENST00000557510 FRMPD3Q5JV73 1810 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 HMGCRP04035 888 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 CYP2B6P20813 491 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
NPC2-209ENST00000557510 HERVK_113P62684 666 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 ZYXQ15942 572 aaKnown RBP11.01□□□□□ -0.65
NPC2-209ENST00000557510 Q3C1V9 767 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
NPC2-209ENST00000557510 RIOK1Q9BRS2 568 aaKnown RBP11.01□□□□□ -0.65
NPC2-209ENST00000557510 HTATIP2Q9BUP3 242 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 PORCNQ9H237 461 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 MYH7P12883 1935 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 RLFQ13129 1914 aa11.01□□□□□ -0.65
NPC2-209ENST00000557510 C19orf81C9J6K1 198 aa11□□□□□ -0.65
NPC2-209ENST00000557510 APBB1O00213 710 aa11□□□□□ -0.65
NPC2-209ENST00000557510 CNMDO75829 334 aa11□□□□□ -0.65
NPC2-209ENST00000557510 HLA-DOAP06340 250 aa11□□□□□ -0.65
NPC2-209ENST00000557510 SHMT1P34896 483 aa11□□□□□ -0.65
NPC2-209ENST00000557510 USP5P45974 858 aa11□□□□□ -0.65
NPC2-209ENST00000557510 PLCD1P51178 756 aa11□□□□□ -0.65
NPC2-209ENST00000557510 SLFNL1Q499Z3 407 aa11□□□□□ -0.65
NPC2-209ENST00000557510 GPRC5AQ8NFJ5 357 aa11□□□□□ -0.65
NPC2-209ENST00000557510 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
NPC2-209ENST00000557510 ACER1Q8TDN7 264 aa11□□□□□ -0.65
NPC2-209ENST00000557510 EDC3Q96F86 508 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms