RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 ATP11BQ9Y2G3 1177 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 LTBP2Q14767 1821 aa14.98□□□□□ -0.01
RTN1-208ENST00000557422 EYSQ5T1H1 3165 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 GH2P01242 217 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 IGHA2P01877 340 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 CYP2C19P33261 490 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 WDR78Q5VTH9 848 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 ADGRA1Q86SQ6 560 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 TRPV1Q8NER1 839 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 NPLOC4Q8TAT6 608 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 C12orf42Q96LP6 360 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
RTN1-208ENST00000557422 SNRKQ9NRH2 765 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 SAP30BPQ9UHR5 308 aaKnown RBP14.97□□□□□ -0.01
RTN1-208ENST00000557422 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
RTN1-208ENST00000557422 PRUNE2Q8WUY3 3088 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 SPTBN5Q9NRC6 3674 aaKnown RBP14.96□□□□□ -0.01
RTN1-208ENST00000557422 GNAI3P08754 354 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 GRB14Q14449 540 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 ZYXQ15942 572 aaKnown RBP14.96□□□□□ -0.01
RTN1-208ENST00000557422 GJC2Q5T442 439 aaPredicted RBP14.96□□□□□ -0.01
RTN1-208ENST00000557422 SLC39A5Q6ZMH5 540 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 ARRDC4Q8NCT1 418 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 MYLIPQ8WY64 445 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 TTYH1Q9H313 450 aaPredicted RBP14.96□□□□□ -0.01
RTN1-208ENST00000557422 BTBD7Q9P203 1132 aa14.96□□□□□ -0.01
RTN1-208ENST00000557422 RLFQ13129 1914 aa14.96□□□□□ -0.02
RTN1-208ENST00000557422 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
RTN1-208ENST00000557422 CYBAP13498 195 aa14.95□□□□□ -0.02
RTN1-208ENST00000557422 SMAD3P84022 425 aaKnown RBP14.95□□□□□ -0.02
RTN1-208ENST00000557422 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
RTN1-208ENST00000557422 BADQ92934 168 aa14.95□□□□□ -0.02
RTN1-208ENST00000557422 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
RTN1-208ENST00000557422 IVNS1ABPQ9Y6Y0 642 aa14.95□□□□□ -0.02
RTN1-208ENST00000557422 CYP2E1P05181 493 aaPredicted RBP14.94□□□□□ -0.02
RTN1-208ENST00000557422 HLA-DOAP06340 250 aa14.94□□□□□ -0.02
RTN1-208ENST00000557422 ATF7IPQ6VMQ6 1270 aa14.94□□□□□ -0.02
RTN1-208ENST00000557422 FEZ1Q99689 392 aa14.94□□□□□ -0.02
RTN1-208ENST00000557422 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
RTN1-208ENST00000557422 PRDM5Q9NQX1 630 aaPredicted RBP14.94□□□□□ -0.02
RTN1-208ENST00000557422 KBTBD13C9JR72 458 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 VCAM1P19320 739 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 USP14P54578 494 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
RTN1-208ENST00000557422 G3BP1Q13283 466 aaKnown RBP eCLIP14.93□□□□□ -0.02
RTN1-208ENST00000557422 SNX17Q15036 470 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 TRIM60Q495X7 471 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 TATDN1Q6P1N9 297 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
RTN1-208ENST00000557422 ACER1Q8TDN7 264 aa14.93□□□□□ -0.02
RTN1-208ENST00000557422 TRIM43BA6NCK2 446 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
RTN1-208ENST00000557422 SPDYE16A6NNV3 312 aaPredicted RBP14.92□□□□□ -0.02
RTN1-208ENST00000557422 FOSL2P15408 326 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 RAB3GAP1Q15042 981 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 ANO1Q5XXA6 986 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 OLFML2BQ68BL8 750 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 SH3RF1Q7Z6J0 888 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 DPP9Q86TI2 863 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 SYMPKQ92797 1274 aaKnown RBP14.92□□□□□ -0.02
RTN1-208ENST00000557422 TRIM43Q96BQ3 446 aaPredicted RBP14.92□□□□□ -0.02
RTN1-208ENST00000557422 PDLIM7Q9NR12 457 aa14.92□□□□□ -0.02
RTN1-208ENST00000557422 MYO5AQ9Y4I1 1855 aaKnown RBP14.91□□□□□ -0.02
RTN1-208ENST00000557422 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
RTN1-208ENST00000557422 CT47B1P0C2W7 299 aaPredicted RBP14.91□□□□□ -0.02
RTN1-208ENST00000557422 ADORA2AP29274 412 aa14.91□□□□□ -0.02
RTN1-208ENST00000557422 RPAP3Q9H6T3 665 aaPredicted RBP14.91□□□□□ -0.02
RTN1-208ENST00000557422 PIH1D3Q9NQM4 214 aaKnown RBP14.91□□□□□ -0.02
RTN1-208ENST00000557422 MYH1P12882 1939 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 SEPT4O43236 478 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 STRNO43815 780 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 IGSF3O75054 1194 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
RTN1-208ENST00000557422 CYP7A1P22680 504 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 ZAP70P43403 619 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 ABCB5Q2M3G0 1257 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
RTN1-208ENST00000557422 CCDC158Q5M9N0 1113 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 C1orf53Q5VUE5 145 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 FERMT2Q96AC1 680 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 DBNDD2Q9BQY9 259 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 MOV10L1Q9BXT6 1211 aaKnown RBP14.9□□□□□ -0.02
RTN1-208ENST00000557422 EHD4Q9H223 541 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 GPR108Q9NPR9 543 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 SERPINB13Q9UIV8 391 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 CDH23Q9H251 3354 aa14.9□□□□□ -0.02
RTN1-208ENST00000557422 COBLO75128 1261 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 GNAI2P04899 355 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 ITGB8P26012 769 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 TLE2Q04725 743 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 LRRC41Q15345 812 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 TNNI3KQ59H18 835 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 PRAMEF19Q5SWL8 479 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 ZNF512BQ96KM6 892 aaPredicted RBP14.89□□□□□ -0.03
RTN1-208ENST00000557422 FPGT-TNNI3KV9GXZ4 949 aa14.89□□□□□ -0.03
RTN1-208ENST00000557422 ZNF236Q9UL36 1845 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms