RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 CCDC144CPQ8IYA2 1237 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 ENGASEQ8NFI3 743 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 ANKS1AQ92625 1134 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 TRIM44Q96DX7 344 aaPredicted RBP9.93□□□□□ -0.82
NEMF-215ENST00000557380 MAP3K14Q99558 947 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 TNMDQ9H2S6 317 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 MCM9Q9NXL9 1143 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 NAV1Q8NEY1 1877 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 SMIM22K7EJ46 135 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 CAVIN2O95810 425 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 USP5P45974 858 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 STK38Q15208 465 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 CCDC73Q6ZRK6 1079 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 CCAR1Q8IX12 1150 aaKnown RBP9.93□□□□□ -0.82
NEMF-215ENST00000557380 SH3RF3Q8TEJ3 882 aaPredicted RBP9.93□□□□□ -0.82
NEMF-215ENST00000557380 MASTLQ96GX5 879 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 AIFM3Q96NN9 605 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 GPR101Q96P66 508 aaPredicted RBP9.93□□□□□ -0.82
NEMF-215ENST00000557380 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEMF-215ENST00000557380 FTOQ9C0B1 505 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEMF-215ENST00000557380 FOXP1Q9H334 677 aaPredicted RBP9.93□□□□□ -0.82
NEMF-215ENST00000557380 TCP11L1Q9NUJ3 509 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 PCDHA7Q9UN72 937 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 JAG2Q9Y219 1238 aa9.93□□□□□ -0.82
NEMF-215ENST00000557380 CDK5RAP2Q96SN8 1893 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 QSER1Q2KHR3 1735 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 DDX60LQ5H9U9 1706 aaKnown RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 C6orf229H3BNL8 230 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 SPTLC2O15270 562 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 PPP6R2O75170 966 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 MMP1P03956 469 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 MMP10P09238 476 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 ME1P48163 572 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 CEBPZQ03701 1054 aaKnown RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 FUT2Q10981 343 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 SNW1Q13573 536 aaKnown RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 SLC39A14Q15043 492 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 SAFBQ15424 915 aaKnown RBP eCLIP9.92□□□□□ -0.82
NEMF-215ENST00000557380 GRIK5Q16478 980 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 DGKHQ86XP1 1220 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 STK11IPQ8N1F8 1099 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 RNF214Q8ND24 703 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 NUP133Q8WUM0 1156 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 MRPS27Q92552 414 aaKnown RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 ZNF287Q9HBT7 754 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 GJB4Q9NTQ9 266 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 CLIC4Q9Y696 253 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 MORC2Q9Y6X9 1032 aaPredicted RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 MYH6P13533 1939 aa9.92□□□□□ -0.82
NEMF-215ENST00000557380 COL11A2P13942 1736 aaPredicted RBP9.92□□□□□ -0.82
NEMF-215ENST00000557380 PRDM1O75626 825 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 CYP2D6P10635 497 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 XBP1P17861 261 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 BTDP43251 543 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 TYRO3Q06418 890 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 SF3A1Q15459 793 aaKnown RBP9.91□□□□□ -0.82
NEMF-215ENST00000557380 DIXDC1Q155Q3 683 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
NEMF-215ENST00000557380 MPNDQ8N594 471 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 JMYQ8N9B5 988 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.91□□□□□ -0.82
NEMF-215ENST00000557380 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
NEMF-215ENST00000557380 FOCADQ5VW36 1801 aa9.91□□□□□ -0.82
NEMF-215ENST00000557380 FAM237AA0A1B0GTK4 181 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 TSPY2A6NKD2 308 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 CMA1P23946 247 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 GUCY1A2P33402 732 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 RHBDL3P58872 404 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 AKAP17AQ02040 695 aaKnown RBP9.9□□□□□ -0.82
NEMF-215ENST00000557380 GNL2Q13823 731 aaKnown RBP9.9□□□□□ -0.82
NEMF-215ENST00000557380 PTPAQ15257 358 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 TPRNQ4KMQ1 711 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 AXDND1Q5T1B0 1012 aaPredicted RBP9.9□□□□□ -0.82
NEMF-215ENST00000557380 STYK1Q6J9G0 422 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 TMTC3Q6ZXV5 915 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 FSIP1Q8NA03 581 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 CTCFLQ8NI51 663 aaPredicted RBP9.9□□□□□ -0.82
NEMF-215ENST00000557380 FAM200AQ8TCP9 573 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 TGFBRAP1Q8WUH2 860 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 EYA3Q99504 573 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 ZC3H12CQ9C0D7 883 aaKnown RBP9.9□□□□□ -0.82
NEMF-215ENST00000557380 TMX4Q9H1E5 349 aaPredicted RBP9.9□□□□□ -0.82
NEMF-215ENST00000557380 GOLPH3LQ9H4A5 285 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 MRVI1Q9Y6F6 885 aa9.9□□□□□ -0.82
NEMF-215ENST00000557380 KINO60870 393 aaKnown RBP9.9□□□□□ -0.83
NEMF-215ENST00000557380 PKN1Q16512 942 aa9.9□□□□□ -0.83
NEMF-215ENST00000557380 CAMK4Q16566 473 aa9.9□□□□□ -0.83
NEMF-215ENST00000557380 RILPL1Q5EBL4 403 aa9.9□□□□□ -0.83
NEMF-215ENST00000557380 RCSD1Q6JBY9 416 aa9.9□□□□□ -0.83
NEMF-215ENST00000557380 SASS6Q6UVJ0 657 aa9.9□□□□□ -0.83
NEMF-215ENST00000557380 DIS3L2Q8IYB7 885 aaKnown RBP9.9□□□□□ -0.83
NEMF-215ENST00000557380 KIF3CO14782 793 aa9.89□□□□□ -0.83
NEMF-215ENST00000557380 KIF5BP33176 963 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms