RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 PCP11498 1178 aaKnown RBP9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 ERICH6BQ5W0A0 696 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 LPAR1Q92633 364 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 C12orf42Q96LP6 360 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 R3HDMLQ9H3Y0 253 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 HOXC10Q9NYD6 342 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 SYNPO2Q9UMS6 1093 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 MYO5AQ9Y4I1 1855 aaKnown RBP9.35□□□□□ -0.91
PSEN1-222ENST00000557356 TRIM17Q9Y577 477 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 OTOFQ9HC10 1997 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 CYP2D6P10635 497 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 FCGRTP55899 365 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-222ENST00000557356 SEPT2Q15019 361 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 OTOP1Q7RTM1 612 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 CD99L2Q8TCZ2 262 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 DYNLL2Q96FJ2 89 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 CCDC136Q96JN2 1154 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 ASCC2Q9H1I8 757 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-222ENST00000557356 GOPCQ9HD26 462 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 CTNNA3Q9UI47 895 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 TMX2Q9Y320 296 aa9.34□□□□□ -0.91
PSEN1-222ENST00000557356 CCDC171Q6TFL3 1326 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 FOCADQ5VW36 1801 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 MYH1P12882 1939 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 LAMB1P07942 1786 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-222ENST00000557356 CHGBP05060 677 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 CYP2C8P10632 490 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 BCRP11274 1271 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 PSMC4P43686 418 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 JAG1P78504 1218 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 ICA1Q05084 483 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 PPARAQ07869 468 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 NMIQ13287 307 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-222ENST00000557356 COG2Q14746 738 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 FAM110CQ1W6H9 321 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 TTC22Q5TAA0 569 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 CCDC84Q86UT8 332 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-222ENST00000557356 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
PSEN1-222ENST00000557356 GPRC5AQ8NFJ5 357 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 COA7Q96BR5 231 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 SEC62Q99442 399 aaKnown RBP9.33□□□□□ -0.92
PSEN1-222ENST00000557356 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-222ENST00000557356 NYAP2Q9P242 653 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 CPA4Q9UI42 421 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 PTPN22Q9Y2R2 807 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 DOCK1Q14185 1865 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 ROBO3Q96MS0 1386 aa9.33□□□□□ -0.92
PSEN1-222ENST00000557356 ZMYM6O95789 1325 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 CYP2D7A0A087X1C5 515 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 FGAP02671 866 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 TSPY3P0CV98 308 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 TSPY8P0CW00 308 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 HSPD1P10809 573 aaKnown RBP9.32□□□□□ -0.92
PSEN1-222ENST00000557356 AKR1B1P15121 316 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 RASA1P20936 1047 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 GUCY1A2P33402 732 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 CCNA1P78396 465 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 TREML2Q5T2D2 321 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 CWC27Q6UX04 472 aaKnown RBP9.32□□□□□ -0.92
PSEN1-222ENST00000557356 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 MB21D1Q8N884 522 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 FAM227BQ96M60 508 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 DSCC1Q9BVC3 393 aa9.32□□□□□ -0.92
PSEN1-222ENST00000557356 EPB41L4AQ9HCS5 686 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-222ENST00000557356 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-222ENST00000557356 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-222ENST00000557356 RAD50Q92878 1312 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 ADGRA2Q96PE1 1338 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 A0A0D9SFI3 127 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 TSPY2A6NKD2 308 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 CCDC85CA6NKD9 419 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 ZNF213O14771 459 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 ORC4O43929 436 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
PSEN1-222ENST00000557356 CAPN2P17655 700 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 MAPK4P31152 587 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 HERVK_113P62684 666 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 ATP2B2Q01814 1243 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 ZYXQ15942 572 aaKnown RBP9.31□□□□□ -0.92
PSEN1-222ENST00000557356 CCDC178Q5BJE1 867 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 LBX2Q6XYB7 198 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 NEDD1Q8NHV4 660 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 ACER1Q8TDN7 264 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 MKL1Q969V6 931 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 P2RX7Q99572 595 aaKnown RBP9.31□□□□□ -0.92
PSEN1-222ENST00000557356 VCPKMTQ9H867 229 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 MORF4L1Q9UBU8 362 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 RABGAP1Q9Y3P9 1069 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 MYH7P12883 1935 aa9.31□□□□□ -0.92
PSEN1-222ENST00000557356 MYPNQ86TC9 1320 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms