RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	DEFB118	Q96PH6	123 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	EMILIN3	Q9NT22	766 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	RBPJL	Q9UBG7	517 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	ZBTB21	Q9ULJ3	1066 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	IGSF3	O75054	1194 aa		13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	FARP2	O94887	1054 aa	Predicted RBP	13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	TATDN1	Q6P1N9	297 aa		13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	FTSJ3	Q8IY81	847 aa	Known RBP	13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MIGA1	Q8NAN2	632 aa		13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	DPF3	Q92784	378 aa		13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	NOL10	Q9BSC4	688 aa	Known RBP	13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	RBM27	Q9P2N5	1060 aa	Known RBP	13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	EXOC6B	Q9Y2D4	811 aa		13.65	□□□□□ -0.22
HNRNPC-231	ENST00000557336	FOCAD	Q5VW36	1801 aa		13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	IDH1	O75874	414 aa	Known RBP	13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336		Q3C1V9	767 aa		13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	SIRT2	Q8IXJ6	389 aa		13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	DIS3L	Q8TF46	1054 aa	Known RBP	13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	RIOK1	Q9BRS2	568 aa	Known RBP	13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	AS3MT	Q9HBK9	375 aa		13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	COL6A3	P12111	3177 aa		13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	PLXNB2	O15031	1838 aa		13.64	□□□□□ -0.23
HNRNPC-231	ENST00000557336	LAMA2	P24043	3122 aa	Known RBP	13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	C19orf81	C9J6K1	198 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	USP17L10	C9JJH3	530 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	GH2	P01242	217 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	TFRC	P02786	760 aa	Known RBP	13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	HERVK_113	P62684	666 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	MAGEB6	Q8N7X4	407 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	FBXO22	Q8NEZ5	403 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	TRIB2	Q92519	343 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	USP6NL	Q92738	828 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.63	□□□□□ -0.23	2e-34	■■□□□ 11.9
HNRNPC-231	ENST00000557336	GINM1	Q9NU53	330 aa		13.63	□□□□□ -0.23
HNRNPC-231	ENST00000557336	HMGCR	P04035	888 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	PLCD1	P51178	756 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	MAP3K21	Q5TCX8	1036 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	AACS	Q86V21	672 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	PAWR	Q96IZ0	340 aa	Known RBP	13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	HTATIP2	Q9BUP3	242 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	EHD4	Q9H223	541 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	PORCN	Q9H237	461 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	IL1RAPL2	Q9NP60	686 aa		13.62	□□□□□ -0.23
HNRNPC-231	ENST00000557336	CNMD	O75829	334 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	GUCY1A2	P33402	732 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	SHMT1	P34896	483 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	IRX3	P78415	501 aa	Predicted RBP	13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	GPRC5A	Q8NFJ5	357 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	RHPN1	Q8TCX5	695 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ACER1	Q8TDN7	264 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	C12orf42	Q96LP6	360 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	TMOD4	Q9NZQ9	345 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ZBED9	Q6R2W3	1325 aa		13.61	□□□□□ -0.23
HNRNPC-231	ENST00000557336	TCRBV5S4A2T	A0A5A2	114 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	HLA-DOA	P06340	250 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	CYP2B6	P20813	491 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ERVK-9	P63128	1117 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ERVK-24	P63145	666 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	GABPA	Q06546	454 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	MORN1	Q5T089	497 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	SERPINB13	Q9UIV8	391 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	RPTOR	Q8N122	1335 aa		13.6	□□□□□ -0.23
HNRNPC-231	ENST00000557336	XRCC5	P13010	732 aa	Known RBP	13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	CAPN2	P17655	700 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	USP5	P45974	858 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	MAP3K12	Q12852	859 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	CCL14	Q16627	93 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	SLFNL1	Q499Z3	407 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	USP17L2	Q6R6M4	530 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ERC1	Q8IUD2	1116 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	EDC3	Q96F86	508 aa	Known RBP	13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	KIAA1683	Q9H0B3	1180 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	HMX1	Q9NP08	348 aa	Predicted RBP	13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ZBTB40	Q9NUA8	1239 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	OGDHL	Q9ULD0	1010 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	NR2E3	Q9Y5X4	410 aa		13.59	□□□□□ -0.23
HNRNPC-231	ENST00000557336	ALPK3	Q96L96	1907 aa		13.58	□□□□□ -0.23
HNRNPC-231	ENST00000557336		A0A1W2PRG0	241 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SMIM22	K7EJ46	135 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PDE6A	P16499	860 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ZYX	Q15942	572 aa	Known RBP	13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	DIEXF	Q68CQ4	756 aa	Known RBP	13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	TMED8	Q6PL24	325 aa	Predicted RBP	13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CATSPERG	Q6ZRH7	1159 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	GPR142	Q7Z601	462 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CERS3	Q8IU89	383 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	TRIM34	Q9BYJ4	488 aa		13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	DDX60L	Q5H9U9	1706 aa	Known RBP	13.58	□□□□□ -0.24
HNRNPC-231	ENST00000557336	MYH1	P12882	1939 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	EVI5	O60447	810 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CHGB	P05060	677 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	VCAM1	P19320	739 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	MAPK4	P31152	587 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CACNB2	Q08289	660 aa	Predicted RBP	13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ABCB5	Q2M3G0	1257 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CERKL	Q49MI3	558 aa	Predicted RBP	13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SLC9C2	Q5TAH2	1124 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	NECAB2	Q7Z6G3	386 aa		13.57	□□□□□ -0.24

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