RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 GTF2E1P29083 439 aaPredicted RBP25.87■■□□□ 1.73
RCCD1-208ENST00000557266 KRT2P35908 639 aa25.87■■□□□ 1.73
RCCD1-208ENST00000557266 MORC3Q14149 939 aa25.87■■□□□ 1.73
RCCD1-208ENST00000557266 RBM28Q9NW13 759 aaKnown RBP25.87■■□□□ 1.73
RCCD1-208ENST00000557266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.87■■□□□ 1.73
RCCD1-208ENST00000557266 MORC2Q9Y6X9 1032 aaPredicted RBP25.87■■□□□ 1.73
RCCD1-208ENST00000557266 TRIM75PA6NK02 468 aa25.86■■□□□ 1.73
RCCD1-208ENST00000557266 MECOMQ03112 1051 aa25.86■■□□□ 1.73
RCCD1-208ENST00000557266 FMR1Q06787 632 aaKnown RBP eCLIP25.86■■□□□ 1.73
RCCD1-208ENST00000557266 ZNF827Q17R98 1081 aa25.86■■□□□ 1.73
RCCD1-208ENST00000557266 SMARCE1Q969G3 411 aa25.86■■□□□ 1.73
RCCD1-208ENST00000557266 CNTNAP4Q9C0A0 1308 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 NRDCO43847 1150 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 MYH6P13533 1939 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 BRWD3Q6RI45 1802 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 TMTC3Q6ZXV5 915 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 MLKLQ8NB16 471 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 SPATA20Q8TB22 786 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 TMX1Q9H3N1 280 aa25.85■■□□□ 1.73
RCCD1-208ENST00000557266 DDAH1O94760 285 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 RPS8P62241 208 aaKnown RBP25.84■■□□□ 1.73
RCCD1-208ENST00000557266 PTPN21Q16825 1174 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 NOL10Q9BSC4 688 aaKnown RBP25.84■■□□□ 1.73
RCCD1-208ENST00000557266 AATFQ9NY61 560 aaKnown RBP eCLIP25.84■■□□□ 1.73
RCCD1-208ENST00000557266 ZNF215Q9UL58 517 aaPredicted RBP25.84■■□□□ 1.73
RCCD1-208ENST00000557266 PDS5AQ29RF7 1337 aaKnown RBP25.84■■□□□ 1.73
RCCD1-208ENST00000557266 WNT7AO00755 349 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 RGL2O15211 777 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 CALM1P0DP23 149 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 CALM2P0DP24 149 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 CALM3P0DP25 149 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 NPY5RQ15761 445 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 FAM182BQ5T319 152 aa25.84■■□□□ 1.73
RCCD1-208ENST00000557266 A0A087X0B3 334 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 ZNF18P17022 549 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 HSP90AA4PQ58FG1 418 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 ZNF772Q68DY9 489 aaPredicted RBP25.83■■□□□ 1.73
RCCD1-208ENST00000557266 KANK3Q6NY19 840 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 TRIML1Q8N9V2 468 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 TNFRSF25Q93038 417 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 DCP1AQ9NPI6 582 aaPredicted RBP25.83■■□□□ 1.73
RCCD1-208ENST00000557266 TFCP2L1Q9NZI6 479 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 NFE2L3Q9Y4A8 694 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 DLEC1Q9Y238 1755 aa25.83■■□□□ 1.73
RCCD1-208ENST00000557266 EP400Q96L91 3159 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 ORC4O43929 436 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 TOP1P11387 765 aaKnown RBP25.82■■□□□ 1.72
RCCD1-208ENST00000557266 ENOX1Q8TC92 643 aaKnown RBP25.82■■□□□ 1.72
RCCD1-208ENST00000557266 MED15Q96RN5 788 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 CNTNAP5Q8WYK1 1306 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 NMT2O60551 498 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 GOLGA8FQ08AF8 430 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 GOLGA8DPQ0D2H9 430 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 NOM1Q5C9Z4 860 aaKnown RBP25.82■■□□□ 1.72
RCCD1-208ENST00000557266 TRMT44Q8IYL2 757 aaKnown RBP25.82■■□□□ 1.72
RCCD1-208ENST00000557266 SRP68Q9UHB9 627 aaKnown RBP25.82■■□□□ 1.72
RCCD1-208ENST00000557266 DACH1Q9UI36 760 aa25.82■■□□□ 1.72
RCCD1-208ENST00000557266 PRDX5P30044 214 aa25.81■■□□□ 1.72
RCCD1-208ENST00000557266 PTF1AQ7RTS3 328 aa25.81■■□□□ 1.72
RCCD1-208ENST00000557266 EPSTI1Q96J88 318 aa25.81■■□□□ 1.72
RCCD1-208ENST00000557266 BCL11BQ9C0K0 894 aaPredicted RBP25.81■■□□□ 1.72
RCCD1-208ENST00000557266 HIBADHP31937 336 aaKnown RBP25.81■■□□□ 1.72
RCCD1-208ENST00000557266 SRBD1Q8N5C6 995 aaKnown RBP25.81■■□□□ 1.72
RCCD1-208ENST00000557266 CRNKL1Q9BZJ0 848 aaKnown RBP25.81■■□□□ 1.72
RCCD1-208ENST00000557266 NYXQ9GZU5 481 aa25.81■■□□□ 1.72
RCCD1-208ENST00000557266 CYP2D6P10635 497 aa25.8■■□□□ 1.72
RCCD1-208ENST00000557266 DHX58Q96C10 678 aa25.8■■□□□ 1.72
RCCD1-208ENST00000557266 NLRP3Q96P20 1036 aa25.8■■□□□ 1.72
RCCD1-208ENST00000557266 NARFQ9UHQ1 456 aa25.8■■□□□ 1.72
RCCD1-208ENST00000557266 FAM47AQ5JRC9 791 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 SYT10Q6XYQ8 523 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 TBX2Q13207 712 aaPredicted RBP25.79■■□□□ 1.72
RCCD1-208ENST00000557266 NBPF5PQ86XG9 351 aaPredicted RBP25.79■■□□□ 1.72
RCCD1-208ENST00000557266 TMEM139Q8IV31 216 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 CCDC24Q8N4L8 307 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 ERO1AQ96HE7 468 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 SETDB2Q96T68 719 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 ATP8A2Q9NTI2 1148 aa25.79■■□□□ 1.72
RCCD1-208ENST00000557266 PLCD1P51178 756 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 SYMPKQ92797 1274 aaKnown RBP25.78■■□□□ 1.72
RCCD1-208ENST00000557266 FERMT2Q96AC1 680 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 ANKRD2Q9GZV1 360 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 L2HGDHQ9H9P8 463 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 BRMS1Q9HCU9 246 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 BMP15O95972 392 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 SLFN14P0C7P3 912 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 SH3RF1Q7Z6J0 888 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 CTCFLQ8NI51 663 aaPredicted RBP25.78■■□□□ 1.72
RCCD1-208ENST00000557266 CGNQ9P2M7 1197 aaKnown RBP25.78■■□□□ 1.72
RCCD1-208ENST00000557266 LY75O60449 1722 aa25.78■■□□□ 1.72
RCCD1-208ENST00000557266 SLU7O95391 586 aaKnown RBP25.77■■□□□ 1.72
RCCD1-208ENST00000557266 CBX1P83916 185 aa25.77■■□□□ 1.72
RCCD1-208ENST00000557266 ZNF174Q15697 407 aa25.77■■□□□ 1.72
RCCD1-208ENST00000557266 TXNRD3Q86VQ6 643 aa25.77■■□□□ 1.72
RCCD1-208ENST00000557266 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.77■■□□□ 1.72
RCCD1-208ENST00000557266 V9GYY5 206 aaPredicted RBP25.77■■□□□ 1.72
RCCD1-208ENST00000557266 LAMB1P07942 1786 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 TTC38Q5R3I4 469 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 PAGE5Q96GU1 130 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 SAMSN1Q9NSI8 373 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms