RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 KIAA1683Q9H0B3 1180 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 STAP2Q9UGK3 403 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 RABGAP1Q9Y3P9 1069 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 FRMPD3Q5JV73 1810 aa17.54■□□□□ 0.4
VRTN-202ENST00000557177 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 VCAM1P19320 739 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 RGS2P41220 211 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP14P54578 494 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 RAB3GAP1Q15042 981 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 ABCB5Q2M3G0 1257 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 LBX2Q6XYB7 198 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 C7orf61Q8IZ16 206 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 MIER1Q8N108 512 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 ACER1Q8TDN7 264 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 FEZ1Q99689 392 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 APBA2Q99767 749 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
VRTN-202ENST00000557177 PFASO15067 1338 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 GUCY1A2P33402 732 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 BMP8BP34820 402 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 GABPAQ06546 454 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
VRTN-202ENST00000557177 CCL14Q16627 93 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.4
VRTN-202ENST00000557177 GDF15Q99988 308 aa17.52■□□□□ 0.4
VRTN-202ENST00000557177 MAGEB6P1A0A0J9YX57 407 aa17.51■□□□□ 0.39
VRTN-202ENST00000557177 SOX1O00570 391 aaPredicted RBP17.51■□□□□ 0.39
VRTN-202ENST00000557177 COL6A1P12109 1028 aa17.51■□□□□ 0.39
VRTN-202ENST00000557177 PDE6AP16499 860 aa17.51■□□□□ 0.39
VRTN-202ENST00000557177 MAP2K5Q13163 448 aa17.51■□□□□ 0.39
VRTN-202ENST00000557177 LHX8Q68G74 356 aa17.51■□□□□ 0.39
VRTN-202ENST00000557177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
VRTN-202ENST00000557177 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
VRTN-202ENST00000557177 CCND3P30281 292 aaPredicted RBP17.5■□□□□ 0.39
VRTN-202ENST00000557177 CCNA1P78396 465 aa17.5■□□□□ 0.39
VRTN-202ENST00000557177 EVX2Q03828 476 aa17.5■□□□□ 0.39
VRTN-202ENST00000557177 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
VRTN-202ENST00000557177 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
VRTN-202ENST00000557177 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
VRTN-202ENST00000557177 A0A0G2JMZ2 1700 aa17.5■□□□□ 0.39
VRTN-202ENST00000557177 RLFQ13129 1914 aa17.49■□□□□ 0.39
VRTN-202ENST00000557177 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
VRTN-202ENST00000557177 POLR3DP05423 398 aaPredicted RBP17.49■□□□□ 0.39
VRTN-202ENST00000557177 SEPT2Q15019 361 aa17.49■□□□□ 0.39
VRTN-202ENST00000557177 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
VRTN-202ENST00000557177 KIF1BPQ96EK5 621 aa17.49■□□□□ 0.39
VRTN-202ENST00000557177 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
VRTN-202ENST00000557177 CRNKL1Q9BZJ0 848 aaKnown RBP17.49■□□□□ 0.39
VRTN-202ENST00000557177 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
VRTN-202ENST00000557177 BTBD7Q9P203 1132 aa17.49■□□□□ 0.39
VRTN-202ENST00000557177 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
VRTN-202ENST00000557177 ZNF532Q9HCE3 1301 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
VRTN-202ENST00000557177 HOXC6P09630 235 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 PTPREP23469 700 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 GRB14Q14449 540 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 RPAP2Q8IXW5 612 aaPredicted RBP17.48■□□□□ 0.39
VRTN-202ENST00000557177 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 MCM9Q9NXL9 1143 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 FLRT1Q9NZU1 646 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 MYH8P13535 1937 aa17.48■□□□□ 0.39
VRTN-202ENST00000557177 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
VRTN-202ENST00000557177 GOLIM4O00461 696 aa17.47■□□□□ 0.39
VRTN-202ENST00000557177 SYN1P17600 705 aa17.47■□□□□ 0.39
VRTN-202ENST00000557177 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
VRTN-202ENST00000557177 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
VRTN-202ENST00000557177 CWC22Q9HCG8 908 aaKnown RBP17.47■□□□□ 0.39
VRTN-202ENST00000557177 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
VRTN-202ENST00000557177 LAMA2P24043 3122 aaKnown RBP17.46■□□□□ 0.39
VRTN-202ENST00000557177 IGHA2P01877 340 aa17.46■□□□□ 0.39
VRTN-202ENST00000557177 MS4A1P11836 297 aa17.46■□□□□ 0.39
VRTN-202ENST00000557177 MAGEA10P43363 369 aaPredicted RBP17.46■□□□□ 0.39
VRTN-202ENST00000557177 DNAJC2Q99543 621 aaKnown RBP17.46■□□□□ 0.39
VRTN-202ENST00000557177 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
VRTN-202ENST00000557177 APBB1O00213 710 aa17.45■□□□□ 0.38
VRTN-202ENST00000557177 HMMRO75330 724 aa17.45■□□□□ 0.38
VRTN-202ENST00000557177 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
VRTN-202ENST00000557177 WDR78Q5VTH9 848 aa17.45■□□□□ 0.38
VRTN-202ENST00000557177 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
VRTN-202ENST00000557177 IVNS1ABPQ9Y6Y0 642 aa17.45■□□□□ 0.38
VRTN-202ENST00000557177 BAZ2AQ9UIF9 1905 aaKnown RBP17.45■□□□□ 0.38
VRTN-202ENST00000557177 PARP14Q460N5 1801 aa17.44■□□□□ 0.38
VRTN-202ENST00000557177 MPHOSPH10O00566 681 aaKnown RBP17.44■□□□□ 0.38
VRTN-202ENST00000557177 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms