RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF654Q8IZM8 581 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
SRP54-213ENST00000556994 PAGE5Q96GU1 130 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 PNKPQ96T60 521 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 ADD3Q9UEY8 706 aaKnown RBP12.95□□□□□ -0.34
SRP54-213ENST00000556994 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 MINDY4BA8MYZ0 360 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 RHOXF2BP0C7M4 288 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 LMAN1P49257 510 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 CUL4BQ13620 913 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
SRP54-213ENST00000556994 SLC35F6Q8N357 371 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 PIGBQ92521 554 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 LPIN2Q92539 896 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 RHOXF2Q9BQY4 288 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 CEP131Q9UPN4 1083 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
SRP54-213ENST00000556994 CCDC151A5D8V7 595 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 TULP2O00295 520 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
SRP54-213ENST00000556994 RAD51AP2Q09MP3 1159 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 DPYDQ12882 1025 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
SRP54-213ENST00000556994 BLZF1Q9H2G9 400 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 CDC23Q9UJX2 597 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 IQSEC3Q9UPP2 1182 aaPredicted RBP12.94□□□□□ -0.34
SRP54-213ENST00000556994 KAT6BQ8WYB5 2073 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 VGLL3A8MV65 326 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
SRP54-213ENST00000556994 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
SRP54-213ENST00000556994 MFAP3LO75121 409 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 STARD3NLO95772 234 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 GYPCP04921 128 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 PBX1P40424 430 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 BCAMP50895 628 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 ZNF174Q15697 407 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 STAG1Q8WVM7 1258 aa12.94□□□□□ -0.34
SRP54-213ENST00000556994 TNS2Q63HR2 1409 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 PPP1R3GB7ZBB8 358 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 FGFR2P21802 821 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 GPS2Q13227 327 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 BEND6Q5SZJ8 279 aaPredicted RBP12.93□□□□□ -0.34
SRP54-213ENST00000556994 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 ZFP91Q96JP5 570 aaPredicted RBP12.93□□□□□ -0.34
SRP54-213ENST00000556994 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 VPS16Q9H269 839 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 ABCB6Q9NP58 842 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 AATFQ9NY61 560 aaKnown RBP eCLIP12.93□□□□□ -0.34
SRP54-213ENST00000556994 CTNND2Q9UQB3 1225 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 CHD4Q14839 1912 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 MAP2K7O14733 419 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 PDE8AO60658 829 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 AKAP17AQ02040 695 aaKnown RBP12.93□□□□□ -0.34
SRP54-213ENST00000556994 BRD3Q15059 726 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 ZSCAN26Q16670 478 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 CDKAL1Q5VV42 579 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 JAKMIP3Q5VZ66 844 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 VPS18Q9P253 973 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 LRP6O75581 1613 aa12.93□□□□□ -0.34
SRP54-213ENST00000556994 CTAGE9A4FU28 777 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 ERVK-24P63145 666 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 PKN1Q16512 942 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
SRP54-213ENST00000556994 V9GY48 417 aaPredicted RBP12.92□□□□□ -0.34
SRP54-213ENST00000556994 MYH8P13535 1937 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 TNKSO95271 1327 aa12.92□□□□□ -0.34
SRP54-213ENST00000556994 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 SLC5A1P13866 664 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 PPARAQ07869 468 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 LRP2BPQ9P2M1 347 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
SRP54-213ENST00000556994 CYP2D7A0A087X1C5 515 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 N4BP3O15049 544 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 KRT2P35908 639 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 VSNL1P62760 191 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 KRT31Q15323 416 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 ADGRA1Q86SQ6 560 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 NUP88Q99567 741 aaPredicted RBP12.91□□□□□ -0.34
SRP54-213ENST00000556994 SLF1Q9BQI6 1058 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 TAB2Q9NYJ8 693 aa12.91□□□□□ -0.34
SRP54-213ENST00000556994 PAPPAQ13219 1627 aa12.9□□□□□ -0.34
SRP54-213ENST00000556994 EVA1CP58658 441 aa12.9□□□□□ -0.34
SRP54-213ENST00000556994 RRAGBQ5VZM2 374 aa12.9□□□□□ -0.34
SRP54-213ENST00000556994 CNGA4Q8IV77 575 aa12.9□□□□□ -0.34
SRP54-213ENST00000556994 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
SRP54-213ENST00000556994 AK7Q96M32 723 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms